| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757739
Identifier: 170757739
GI number: 170757739
Start: 3501746
End: 3502153
Strand: Reverse
Name: 170757739
Synonym: CLD_1308
Alternate gene names: NA
Gene position: 3502153-3501746 (Counterclockwise)
Preceding gene: 170754366
Following gene: 170756608
Centisome position: 88.48
GC content: 19.61
Gene sequence:
>408_bases ATGTCTAAGCACAAAAAAAAACATAAAGATAGATATGATAATGGAAATGGAAATAACTTAGATATGAATAATATACAAAA TATGTTAAATAATATAGATATGAATCAATTATCTAATATAATGTCATCATTAAATAAAGGAAATAATAATTATAATAATC ATAATGATTATGATGATGATGATGAGACATATGATAATAATAATAATTCATTTAATAATATGAATAACATGAACAATGGG AATAACATGAATAATAACTCGTTTAATAATATGATACCAAATCAAATAAAAAATGATTATACATTACAATTTTTAAATAT GTTAAGGCCTATGGTTAATCCAGATAAGAAAGACCTTTTAGATAAATTAATCCAGATATATTATGTAAGTAGATTGATGA AAAAATAA
Upstream 100 bases:
>100_bases ATTCTTCTTATGCTGTTGTGGAGATTTCTCATTATGCTGCTGCTAATAACTTAGGAGGGTTCATTACCCTCCTTGCCATT AATTTAAATGGAGGTAATCA
Downstream 100 bases:
>100_bases ATACTATTTTTTATAGAAAGACTTAAAGTTCTTTCTATTTTTTTAGCATAATAATTGTATCAATATAACTATTTGAAAAA TTAATAGTCTTAAATTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSKHKKKHKDRYDNGNGNNLDMNNIQNMLNNIDMNQLSNIMSSLNKGNNNYNNHNDYDDDDETYDNNNNSFNNMNNMNNG NNMNNNSFNNMIPNQIKNDYTLQFLNMLRPMVNPDKKDLLDKLIQIYYVSRLMKK
Sequences:
>Translated_135_residues MSKHKKKHKDRYDNGNGNNLDMNNIQNMLNNIDMNQLSNIMSSLNKGNNNYNNHNDYDDDDETYDNNNNSFNNMNNMNNG NNMNNNSFNNMIPNQIKNDYTLQFLNMLRPMVNPDKKDLLDKLIQIYYVSRLMKK >Mature_134_residues SKHKKKHKDRYDNGNGNNLDMNNIQNMLNNIDMNQLSNIMSSLNKGNNNYNNHNDYDDDDETYDNNNNSFNNMNNMNNGN NMNNNSFNNMIPNQIKNDYTLQFLNMLRPMVNPDKKDLLDKLIQIYYVSRLMKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15992; Mature: 15861
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.9 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.2 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHKKKHKDRYDNGNGNNLDMNNIQNMLNNIDMNQLSNIMSSLNKGNNNYNNHNDYDDD CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC DETYDNNNNSFNNMNNMNNGNNMNNNSFNNMIPNQIKNDYTLQFLNMLRPMVNPDKKDLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHH DKLIQIYYVSRLMKK HHHHHHHHHHHHHHC >Mature Secondary Structure SKHKKKHKDRYDNGNGNNLDMNNIQNMLNNIDMNQLSNIMSSLNKGNNNYNNHNDYDDD CCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC DETYDNNNNSFNNMNNMNNGNNMNNNSFNNMIPNQIKNDYTLQFLNMLRPMVNPDKKDLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHH DKLIQIYYVSRLMKK HHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA