Click here to switch to the map view.

The map label for this gene is 170754366

Identifier: 170754366

GI number: 170754366

Start: 3502208

End: 3502453

Strand: Reverse

Name: 170754366

Synonym: CLD_1307

Alternate gene names: NA

Gene position: 3502453-3502208 (Counterclockwise)

Preceding gene: 170756913

Following gene: 170757739

Centisome position: 88.49

GC content: 36.59

Gene sequence:

>246_bases
ATGTCAAAGAGACGTAGATGCAAATGCAAAAGCAAGCGCAGATGCAGAGAAGGAAGAGGCTCATGTAATGGGCTACTAAT
ATTAATATTAATATTACTACAATTTGGCTGCTGCAGAGAAAGAGGATGTCATGATGAAGGTCTTATAGGCAGGGGAAGAG
GTTGTGAAATAGACAATAGTATACTATTTATAATAGTATTATTCTTCTTATGCTGTTGTGGAGATTTCTCATTATGCTGC
TGCTAA

Upstream 100 bases:

>100_bases
AAGATCATGTGATAATATAATCGATGTAGATTCTAGAGAAGAATGCTAAGGAAGAAGAATAAGATACAAAGAGCCATAGC
CCGAGGAAGGGGGGTTTAGC

Downstream 100 bases:

>100_bases
TAACTTAGGAGGGTTCATTACCCTCCTTGCCATTAATTTAAATGGAGGTAATCAATGTCTAAGCACAAAAAAAAACATAA
AGATAGATATGATAATGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSKRRRCKCKSKRRCREGRGSCNGLLILILILLQFGCCRERGCHDEGLIGRGRGCEIDNSILFIIVLFFLCCCGDFSLCC
C

Sequences:

>Translated_81_residues
MSKRRRCKCKSKRRCREGRGSCNGLLILILILLQFGCCRERGCHDEGLIGRGRGCEIDNSILFIIVLFFLCCCGDFSLCC
C
>Mature_80_residues
SKRRRCKCKSKRRCREGRGSCNGLLILILILLQFGCCRERGCHDEGLIGRGRGCEIDNSILFIIVLFFLCCCGDFSLCCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9170; Mature: 9039

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

17.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
18.5 %Cys+Met (Translated Protein)
17.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
17.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRRRCKCKSKRRCREGRGSCNGLLILILILLQFGCCRERGCHDEGLIGRGRGCEIDNS
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
ILFIIVLFFLCCCGDFSLCCC
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SKRRRCKCKSKRRCREGRGSCNGLLILILILLQFGCCRERGCHDEGLIGRGRGCEIDNS
CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
ILFIIVLFFLCCCGDFSLCCC
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA