| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757697
Identifier: 170757697
GI number: 170757697
Start: 2760
End: 2966
Strand: Direct
Name: 170757697
Synonym: CLD_0823
Alternate gene names: NA
Gene position: 2760-2966 (Clockwise)
Preceding gene: 170757193
Following gene: 170755060
Centisome position: 0.07
GC content: 24.15
Gene sequence:
>207_bases ATGGTTGAAATAAAAATTAATTCAGAAATAATAAAATTAGATTCTTTCTTAAAATGGTCAGGGGCAACAACTTTAGGTTC AGAGGCTAAATTTTTTATACAAAACGGAGAAGTTAAAGTTAATGGAGAAATAGAAAAAAGAAGAGGTAGAAAACTTAAAA TAGACGACTTAATAGAGTTTAATAATGAAACATATAAAATTATTTAA
Upstream 100 bases:
>100_bases TGTAAGTCCTTGTATTATAAAAAATACAGAAATAAACAATTGCACTTACCTAGTTTTACCAGTAAGATTAAACAATAATT AATTAAAAGAGGTATTAAAA
Downstream 100 bases:
>100_bases AATTTTATATAAATTTTAAATAATTGTTACTAAAAAATATTATGGTATAATTAATTTAGGTGTTTAGAATGTATATAAAA AATGTGCACTTAATAAATTT
Product: S4 domain-containing protein
Products: NA
Alternate protein names: S4 Domain-Containing Protein; S4 Domain Protein; S4 Domain-Containing Protein YaaA; S4 Region YaaA
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MVEIKINSEIIKLDSFLKWSGATTLGSEAKFFIQNGEVKVNGEIEKRRGRKLKIDDLIEFNNETYKII
Sequences:
>Translated_68_residues MVEIKINSEIIKLDSFLKWSGATTLGSEAKFFIQNGEVKVNGEIEKRRGRKLKIDDLIEFNNETYKII >Mature_68_residues MVEIKINSEIIKLDSFLKWSGATTLGSEAKFFIQNGEVKVNGEIEKRRGRKLKIDDLIEFNNETYKII
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7860; Mature: 7860
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEIKINSEIIKLDSFLKWSGATTLGSEAKFFIQNGEVKVNGEIEKRRGRKLKIDDLIEF CEEEEECCEEEEECCEEEECCCCCCCCCEEEEEECCEEEECCEECCCCCCEEEECCEEEC NNETYKII CCCEEEEC >Mature Secondary Structure MVEIKINSEIIKLDSFLKWSGATTLGSEAKFFIQNGEVKVNGEIEKRRGRKLKIDDLIEF CEEEEECCEEEEECCEEEECCCCCCCCCEEEEEECCEEEECCEECCCCCCEEEECCEEEC NNETYKII CCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA