| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is fusA
Identifier: 170757683
GI number: 170757683
Start: 3814731
End: 3816803
Strand: Reverse
Name: fusA
Synonym: CLD_0987
Alternate gene names: 170757683
Gene position: 3816803-3814731 (Counterclockwise)
Preceding gene: 170755247
Following gene: 170756880
Centisome position: 96.43
GC content: 30.05
Gene sequence:
>2073_bases ATGAATTATAGCGCCACCAATCTAAGGAATGTAGGCATAATTGGACATAGTGGATCAGGAAAAACTTCTTTAACAGAAGC TATTTTATATTTTACAAGCATGGTAGATAGATTAGGTACCATAGAAGAGGGAAATACTGTATCTGATTATGATACAGAGG AAAAAAAACGTAAAATATCTATATCTACCACAATACAACCGTGTAAATGGAAAGACACAAAAATTAATTTGATTGATATG CCTGGTTATTTTGATTTTGTAGGAGAAAAGATTCAAGGGTTAAAAGCTGCCGATATTGCTCTTATAGTATTGTCAGCAAC AGGAAATATACATGTTGAAACAGAAAAATCTTGGAATTATACAACAAAAGAGAAAATACCTAAAGCATTTTATATAAACA AATTAGATAAAGAAAATATGGATTTTGAAGGCACTTTAAATAAACTTAAAGAAAGATATGGTACATCTGTAGTACCTGTT CAATACCCTATAGGAAAAGAAGAAAATTTTAAAGGTGTAATTAATGTTATTTCTAATAAAGCAACTATATTTAATGATAA AACACATGAGATAGAAATAAAAGAAGTACCAAATGAATTATTAGATGAAGTTAATGAATGTAAAAATATGATTGTAGAAG CAGTAGCTGAAACAGATGAGAAGCTTTTAGAAAAATATTTTGATGAAGGTACACTAAGTGAAAAGGATATATATGAAGGA TTAATGGCAGGAACTGTAAAAGGAGAAATAGTTCCGGTAATGTGTGGGTCAGCCATAAAGGCTATAGGTATTGAAACCTT TTTAGAGGATGTAGTTCAATGGTTTCCATCACCAGCAGAAACAAAAAAAATGGAAGTATCAGATGGTATAAATAAAAATA ATATAGAAATAAATTGTAATGAAAAAGAACCATTTTCAGCACTGGTTTTTAAAACTATTATAGATCCTTTTATAGGTAGA TTATCATTATTCAAAGTAACGAGTGGAGTGCTAAATGAAGAGAGCTCTATTTATAATTCAACAAAAGATAAAAAGGAGAA GGTAGGTAAATTATATTTCCTAAGGGGCAAGCAACAAATTCAAACAGATAGAGTAATTTCAGGAGATATAGGGGCAGTTA GTAAATTACAATATACTTTTACAGGAGATACTTTGTGTGATTTAAAAAGAAAAATATTATTGGAAAATATAGATTTTCCT AAAGCTAATATGACTATGGCAGCATTACCTAAATCAAAAAATGATGAAGATAAAATGTTTTATGCCCTAGACAAATTGGT GGAGGAAGACCCTACGATATATATAAGTAGAGATTTAGAAAATGCAGAAACATTAATATCAGGTATGGGAGATATACATT TAGAAGTAATAGCAAATAGAGTGAAAAATAAATTTGGGACAGAAATGGTATTGGATTCACCTAAAATTCCATATAGGGAG ACTATAAAATCTATATCTAAGGTTCAAGGAAAGCATAAAAAGCAATCTGGCGGACATGGTCAATATGGAGATGTATTTAT AAAATTCGAACCAAATAAAAATAGCGAGTTTGAATTTGTGAATAATATAGTTGGAGGGGTAGTTCCTAAACAATATATTC CTGCAGTAGAAGAAGGAATTTTAGAATGCATGAAGAAGGGAGTCTTAGCAGAATATCCTGTTATAGGAATTAAGGCTACA ATATACGATGGTTCATATCATTCAGTAGATTCATCTGAAATGGCTTTTAAAATTGCAGCATCTATTGCATTTAAAAAAGG AATAAAGGAAGCAAAGCCAACTTTATTAGAACCTATAATGCGTTTAGAAGTGATATCATCAGAGGAATATATGGGGGATA TTATAGGAGATATAAATAGAAAGAGAGGTAAAATTCTAGGCATGGAGCAGGAAGCTAATAATTTAGAAAGAATTGTAGCA GAAGTACCTCAGGCGGAAATCCTAAATTATTCTACAGATTTAAGGAGTATAACTCAAGGTATGGGAGAATTTTCTTTAAG CTTTGAAAGATATGATGAAATTTTAGATCCTATTGAGGTTGAAAAAGTATTATCTAGTAAAAATAAAATATAG
Upstream 100 bases:
>100_bases GTATAGTCTGATTATTAAGAAAATTAGTAATTTTTGAAAGGATTTTATATTATCAAATAGAATATATATTTAAGCCATAA AATAGATAGGGGGAATTAGT
Downstream 100 bases:
>100_bases TATAAAAATCACCTAGTTTCTAGGTGATTTTTATACTATATTTTATTTAGTGTTTTTTATTATTTTAGTATTTCCATTTA GATCAAATACCTTTTGAAAT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MNYSATNLRNVGIIGHSGSGKTSLTEAILYFTSMVDRLGTIEEGNTVSDYDTEEKKRKISISTTIQPCKWKDTKINLIDM PGYFDFVGEKIQGLKAADIALIVLSATGNIHVETEKSWNYTTKEKIPKAFYINKLDKENMDFEGTLNKLKERYGTSVVPV QYPIGKEENFKGVINVISNKATIFNDKTHEIEIKEVPNELLDEVNECKNMIVEAVAETDEKLLEKYFDEGTLSEKDIYEG LMAGTVKGEIVPVMCGSAIKAIGIETFLEDVVQWFPSPAETKKMEVSDGINKNNIEINCNEKEPFSALVFKTIIDPFIGR LSLFKVTSGVLNEESSIYNSTKDKKEKVGKLYFLRGKQQIQTDRVISGDIGAVSKLQYTFTGDTLCDLKRKILLENIDFP KANMTMAALPKSKNDEDKMFYALDKLVEEDPTIYISRDLENAETLISGMGDIHLEVIANRVKNKFGTEMVLDSPKIPYRE TIKSISKVQGKHKKQSGGHGQYGDVFIKFEPNKNSEFEFVNNIVGGVVPKQYIPAVEEGILECMKKGVLAEYPVIGIKAT IYDGSYHSVDSSEMAFKIAASIAFKKGIKEAKPTLLEPIMRLEVISSEEYMGDIIGDINRKRGKILGMEQEANNLERIVA EVPQAEILNYSTDLRSITQGMGEFSLSFERYDEILDPIEVEKVLSSKNKI
Sequences:
>Translated_690_residues MNYSATNLRNVGIIGHSGSGKTSLTEAILYFTSMVDRLGTIEEGNTVSDYDTEEKKRKISISTTIQPCKWKDTKINLIDM PGYFDFVGEKIQGLKAADIALIVLSATGNIHVETEKSWNYTTKEKIPKAFYINKLDKENMDFEGTLNKLKERYGTSVVPV QYPIGKEENFKGVINVISNKATIFNDKTHEIEIKEVPNELLDEVNECKNMIVEAVAETDEKLLEKYFDEGTLSEKDIYEG LMAGTVKGEIVPVMCGSAIKAIGIETFLEDVVQWFPSPAETKKMEVSDGINKNNIEINCNEKEPFSALVFKTIIDPFIGR LSLFKVTSGVLNEESSIYNSTKDKKEKVGKLYFLRGKQQIQTDRVISGDIGAVSKLQYTFTGDTLCDLKRKILLENIDFP KANMTMAALPKSKNDEDKMFYALDKLVEEDPTIYISRDLENAETLISGMGDIHLEVIANRVKNKFGTEMVLDSPKIPYRE TIKSISKVQGKHKKQSGGHGQYGDVFIKFEPNKNSEFEFVNNIVGGVVPKQYIPAVEEGILECMKKGVLAEYPVIGIKAT IYDGSYHSVDSSEMAFKIAASIAFKKGIKEAKPTLLEPIMRLEVISSEEYMGDIIGDINRKRGKILGMEQEANNLERIVA EVPQAEILNYSTDLRSITQGMGEFSLSFERYDEILDPIEVEKVLSSKNKI >Mature_690_residues MNYSATNLRNVGIIGHSGSGKTSLTEAILYFTSMVDRLGTIEEGNTVSDYDTEEKKRKISISTTIQPCKWKDTKINLIDM PGYFDFVGEKIQGLKAADIALIVLSATGNIHVETEKSWNYTTKEKIPKAFYINKLDKENMDFEGTLNKLKERYGTSVVPV QYPIGKEENFKGVINVISNKATIFNDKTHEIEIKEVPNELLDEVNECKNMIVEAVAETDEKLLEKYFDEGTLSEKDIYEG LMAGTVKGEIVPVMCGSAIKAIGIETFLEDVVQWFPSPAETKKMEVSDGINKNNIEINCNEKEPFSALVFKTIIDPFIGR LSLFKVTSGVLNEESSIYNSTKDKKEKVGKLYFLRGKQQIQTDRVISGDIGAVSKLQYTFTGDTLCDLKRKILLENIDFP KANMTMAALPKSKNDEDKMFYALDKLVEEDPTIYISRDLENAETLISGMGDIHLEVIANRVKNKFGTEMVLDSPKIPYRE TIKSISKVQGKHKKQSGGHGQYGDVFIKFEPNKNSEFEFVNNIVGGVVPKQYIPAVEEGILECMKKGVLAEYPVIGIKAT IYDGSYHSVDSSEMAFKIAASIAFKKGIKEAKPTLLEPIMRLEVISSEEYMGDIIGDINRKRGKILGMEQEANNLERIVA EVPQAEILNYSTDLRSITQGMGEFSLSFERYDEILDPIEVEKVLSSKNKI
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=682, Percent_Identity=33.2844574780059, Blast_Score=398, Evalue=1e-111, Organism=Homo sapiens, GI19923640, Length=734, Percent_Identity=27.2479564032698, Blast_Score=307, Evalue=2e-83, Organism=Homo sapiens, GI25306283, Length=399, Percent_Identity=29.0726817042606, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI25306287, Length=294, Percent_Identity=30.952380952381, Blast_Score=158, Evalue=2e-38, Organism=Escherichia coli, GI1789738, Length=680, Percent_Identity=40, Blast_Score=542, Evalue=1e-155, Organism=Escherichia coli, GI1790835, Length=494, Percent_Identity=24.6963562753036, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI48994988, Length=134, Percent_Identity=32.8358208955224, Blast_Score=67, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17533571, Length=677, Percent_Identity=29.9852289512555, Blast_Score=350, Evalue=2e-96, Organism=Caenorhabditis elegans, GI17556745, Length=708, Percent_Identity=24.1525423728814, Blast_Score=215, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6323098, Length=677, Percent_Identity=31.7577548005908, Blast_Score=351, Evalue=2e-97, Organism=Saccharomyces cerevisiae, GI6322359, Length=773, Percent_Identity=27.1668822768435, Blast_Score=284, Evalue=3e-77, Organism=Saccharomyces cerevisiae, GI6324707, Length=825, Percent_Identity=21.4545454545455, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6320593, Length=825, Percent_Identity=21.4545454545455, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI24582462, Length=684, Percent_Identity=33.3333333333333, Blast_Score=398, Evalue=1e-111, Organism=Drosophila melanogaster, GI221458488, Length=711, Percent_Identity=27.7074542897328, Blast_Score=253, Evalue=4e-67,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77340; Mature: 77340
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYSATNLRNVGIIGHSGSGKTSLTEAILYFTSMVDRLGTIEEGNTVSDYDTEEKKRKIS CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEE ISTTIQPCKWKDTKINLIDMPGYFDFVGEKIQGLKAADIALIVLSATGNIHVETEKSWNY EEECCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEECCEEEEEEECCCCEEEEECCCCCC TTKEKIPKAFYINKLDKENMDFEGTLNKLKERYGTSVVPVQYPIGKEENFKGVINVISNK CHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC ATIFNDKTHEIEIKEVPNELLDEVNECKNMIVEAVAETDEKLLEKYFDEGTLSEKDIYEG EEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LMAGTVKGEIVPVMCGSAIKAIGIETFLEDVVQWFPSPAETKKMEVSDGINKNNIEINCN HHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHCCCCCCCEEEECC EKEPFSALVFKTIIDPFIGRLSLFKVTSGVLNEESSIYNSTKDKKEKVGKLYFLRGKQQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCEEEECCCHHH QTDRVISGDIGAVSKLQYTFTGDTLCDLKRKILLENIDFPKANMTMAALPKSKNDEDKMF HHCCEECCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH YALDKLVEEDPTIYISRDLENAETLISGMGDIHLEVIANRVKNKFGTEMVLDSPKIPYRE HHHHHHHCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHH TIKSISKVQGKHKKQSGGHGQYGDVFIKFEPNKNSEFEFVNNIVGGVVPKQYIPAVEEGI HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHCCHHHHHH LECMKKGVLAEYPVIGIKATIYDGSYHSVDSSEMAFKIAASIAFKKGIKEAKPTLLEPIM HHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RLEVISSEEYMGDIIGDINRKRGKILGMEQEANNLERIVAEVPQAEILNYSTDLRSITQG HHHHHCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHC MGEFSLSFERYDEILDPIEVEKVLSSKNKI HHHHEECHHHHHHHHCHHHHHHHHHCCCCC >Mature Secondary Structure MNYSATNLRNVGIIGHSGSGKTSLTEAILYFTSMVDRLGTIEEGNTVSDYDTEEKKRKIS CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEE ISTTIQPCKWKDTKINLIDMPGYFDFVGEKIQGLKAADIALIVLSATGNIHVETEKSWNY EEECCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEECCEEEEEEECCCCEEEEECCCCCC TTKEKIPKAFYINKLDKENMDFEGTLNKLKERYGTSVVPVQYPIGKEENFKGVINVISNK CHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC ATIFNDKTHEIEIKEVPNELLDEVNECKNMIVEAVAETDEKLLEKYFDEGTLSEKDIYEG EEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LMAGTVKGEIVPVMCGSAIKAIGIETFLEDVVQWFPSPAETKKMEVSDGINKNNIEINCN HHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHCCCCCCCEEEECC EKEPFSALVFKTIIDPFIGRLSLFKVTSGVLNEESSIYNSTKDKKEKVGKLYFLRGKQQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCEEEECCCHHH QTDRVISGDIGAVSKLQYTFTGDTLCDLKRKILLENIDFPKANMTMAALPKSKNDEDKMF HHCCEECCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH YALDKLVEEDPTIYISRDLENAETLISGMGDIHLEVIANRVKNKFGTEMVLDSPKIPYRE HHHHHHHCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHH TIKSISKVQGKHKKQSGGHGQYGDVFIKFEPNKNSEFEFVNNIVGGVVPKQYIPAVEEGI HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHCCHHHHHH LECMKKGVLAEYPVIGIKATIYDGSYHSVDSSEMAFKIAASIAFKKGIKEAKPTLLEPIM HHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RLEVISSEEYMGDIIGDINRKRGKILGMEQEANNLERIVAEVPQAEILNYSTDLRSITQG HHHHHCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHC MGEFSLSFERYDEILDPIEVEKVLSSKNKI HHHHEECHHHHHHHHCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA