| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is resE [H]
Identifier: 170757594
GI number: 170757594
Start: 2653488
End: 2655197
Strand: Reverse
Name: resE [H]
Synonym: CLD_2109
Alternate gene names: 170757594
Gene position: 2655197-2653488 (Counterclockwise)
Preceding gene: 170756077
Following gene: 170755717
Centisome position: 67.08
GC content: 25.38
Gene sequence:
>1710_bases ATGAAAAAAAAATTAACATTATCAATACTTATAATTTTAATATTTACATTAACAATAGTATCATCACTTTTCTTAATAAC TATTAATAATCAATATATAGAAAGCAGTAAAAATAGATTAAAGAATAATAATTCCTTTATATTGAAAGTAATAAGAAATG AAGATCCTAAAAATATTGTTAATTTTATAAAGAATAATTATAGAGATAATGATATAAGGGTAACTTTATTAGATCATAAA GGGAATGTTTTAGTAGATTCTAAAGAAAATAGAGTAGAATTAGAAAATCATAATAAAAGAGAAGAAATAGTAAATGCAAA AAAAAATGGAGAGGCTTATAGTGTAAGATATAGTAATACAAGAAAAGTAGAAAGTCTCTATTTTGCAAGCAAAGTTAATA ATGATTATATTATAAGAAGTGCCATAGATATGAAAGATATAAAATTATTAGAAAAAAAATATAGTAAATACTATATTTCT ATAATATTATTTTCTTTTGTTCTATCTTTTTTATTTTCATCCAGAATATCAATGGCTATGATAAAACCTATAAAAAATCT TGAATTTGTAACTTCAAGAATAGCAAGAGGAGACTTTGATAGAAGAGTAATAATAAATTCAGAGGATGAAATAGGACGAC TTGGAAGAACCTTCAATGCCATGGCAGATATATTGGAAAATAGCTTGGTGGAAGTTAGAGATAAGCAAAATAGACTAGAG GCTATACTTAAGAGTATGGACAGTGGTGTTGTAGCTATAGACAAAGAGTTTAAAGTTATTATGATTAATCCTTATGCTAA CAAATTATTTGGTATAAAAAGAGATATAATAGGGGAAAACCTTATGGATAATATAAGAGATTTTGAATTAGAAAAAGTAT TAAAGGATAAAGAACCTGGCTATAAAGAAATAGGCATATTATGGCCAGAAAAAAGAACCCTTAGAGTTAAAACTACAGAT ATAATAAGTAAATATGATAATATAGGTACTGTGGCAGTAGTGCAGGATATAACAGATATAAAGAAACTAGAAAATATGAG AGAACAGTTTGTAGCAAATGTATCCCATGAATTAAAAACTCCATTAACATCTATAAAGGGTTTCTCAGAAACTTTAAAGT ATGTAGATGATAAAAAGAATAGGGAAAAATTTTTACAAATAATAAACGATGAAGCGGATAGGCTTACAAGATTAATAAAT GATATATTAGTATTATCCAATATAGAGAAACAAAAGCAAGAGTTAATAAAAGAGAAAATAGATTTAAATGAATTAATTGA AAAAGTATATTGTTTAGTAAAAAAATCTGCAGAGGATAAAAATATAAAAATAAATATTGTAGGAGAAAAAATACCTTTAT TAATAGGAAATAAGGATAAATATAATCAAATGATAATAAATTTGGTAGATAATGCCATTAAATACACAGAGCCTAATGGT TATGTAAGTATAGGTACAAAACAAGATAAAGGTAATATAGTATTTTGGGTAGAGGATACAGGAGTAGGTATTTCCGAAGA ACATCTAGACAGAATATTTGAAAGATTTTATAGAGTGGATAAAGCTAGATCTAGAGCAGAAGGGGGAACGGGGCTAGGTT TAGCCATAGTAAAACATATAGTTCTAAGTATTAATGGGAAAATAGAAGTAAAAAGTGAACCTAAAAAAGGAACTAAATTT ATAGTAAAAATACCTTTAAGTATAATATAG
Upstream 100 bases:
>100_bases TAAGAAAAAAAATAGAGGATGATGATAAAAATCCTAAGTTTATTGAAACTATAAGGGGAATAGGATATAGATTCAATAGT GAATTTTAAAAGGTGAAGTT
Downstream 100 bases:
>100_bases ATTAAAATAAAAATATAAAATGAAGAAGTTTTTGGTGCCTATAACAAAAACTTCTTCATTTTTCTATATATAGGATTTTA GGACTGTTTAGAAATAAAAA
Product: putative phosphate regulon sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MKKKLTLSILIILIFTLTIVSSLFLITINNQYIESSKNRLKNNNSFILKVIRNEDPKNIVNFIKNNYRDNDIRVTLLDHK GNVLVDSKENRVELENHNKREEIVNAKKNGEAYSVRYSNTRKVESLYFASKVNNDYIIRSAIDMKDIKLLEKKYSKYYIS IILFSFVLSFLFSSRISMAMIKPIKNLEFVTSRIARGDFDRRVIINSEDEIGRLGRTFNAMADILENSLVEVRDKQNRLE AILKSMDSGVVAIDKEFKVIMINPYANKLFGIKRDIIGENLMDNIRDFELEKVLKDKEPGYKEIGILWPEKRTLRVKTTD IISKYDNIGTVAVVQDITDIKKLENMREQFVANVSHELKTPLTSIKGFSETLKYVDDKKNREKFLQIINDEADRLTRLIN DILVLSNIEKQKQELIKEKIDLNELIEKVYCLVKKSAEDKNIKINIVGEKIPLLIGNKDKYNQMIINLVDNAIKYTEPNG YVSIGTKQDKGNIVFWVEDTGVGISEEHLDRIFERFYRVDKARSRAEGGTGLGLAIVKHIVLSINGKIEVKSEPKKGTKF IVKIPLSII
Sequences:
>Translated_569_residues MKKKLTLSILIILIFTLTIVSSLFLITINNQYIESSKNRLKNNNSFILKVIRNEDPKNIVNFIKNNYRDNDIRVTLLDHK GNVLVDSKENRVELENHNKREEIVNAKKNGEAYSVRYSNTRKVESLYFASKVNNDYIIRSAIDMKDIKLLEKKYSKYYIS IILFSFVLSFLFSSRISMAMIKPIKNLEFVTSRIARGDFDRRVIINSEDEIGRLGRTFNAMADILENSLVEVRDKQNRLE AILKSMDSGVVAIDKEFKVIMINPYANKLFGIKRDIIGENLMDNIRDFELEKVLKDKEPGYKEIGILWPEKRTLRVKTTD IISKYDNIGTVAVVQDITDIKKLENMREQFVANVSHELKTPLTSIKGFSETLKYVDDKKNREKFLQIINDEADRLTRLIN DILVLSNIEKQKQELIKEKIDLNELIEKVYCLVKKSAEDKNIKINIVGEKIPLLIGNKDKYNQMIINLVDNAIKYTEPNG YVSIGTKQDKGNIVFWVEDTGVGISEEHLDRIFERFYRVDKARSRAEGGTGLGLAIVKHIVLSINGKIEVKSEPKKGTKF IVKIPLSII >Mature_569_residues MKKKLTLSILIILIFTLTIVSSLFLITINNQYIESSKNRLKNNNSFILKVIRNEDPKNIVNFIKNNYRDNDIRVTLLDHK GNVLVDSKENRVELENHNKREEIVNAKKNGEAYSVRYSNTRKVESLYFASKVNNDYIIRSAIDMKDIKLLEKKYSKYYIS IILFSFVLSFLFSSRISMAMIKPIKNLEFVTSRIARGDFDRRVIINSEDEIGRLGRTFNAMADILENSLVEVRDKQNRLE AILKSMDSGVVAIDKEFKVIMINPYANKLFGIKRDIIGENLMDNIRDFELEKVLKDKEPGYKEIGILWPEKRTLRVKTTD IISKYDNIGTVAVVQDITDIKKLENMREQFVANVSHELKTPLTSIKGFSETLKYVDDKKNREKFLQIINDEADRLTRLIN DILVLSNIEKQKQELIKEKIDLNELIEKVYCLVKKSAEDKNIKINIVGEKIPLLIGNKDKYNQMIINLVDNAIKYTEPNG YVSIGTKQDKGNIVFWVEDTGVGISEEHLDRIFERFYRVDKARSRAEGGTGLGLAIVKHIVLSINGKIEVKSEPKKGTKF IVKIPLSII
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=340, Percent_Identity=32.0588235294118, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1790346, Length=234, Percent_Identity=33.7606837606838, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1788393, Length=277, Percent_Identity=29.9638989169675, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI48994928, Length=259, Percent_Identity=30.8880308880309, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1789149, Length=230, Percent_Identity=33.9130434782609, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1786783, Length=233, Percent_Identity=33.0472103004292, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1790436, Length=225, Percent_Identity=31.5555555555556, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI145693157, Length=222, Percent_Identity=31.981981981982, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1788549, Length=378, Percent_Identity=25.1322751322751, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI87081816, Length=238, Percent_Identity=28.9915966386555, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1788713, Length=282, Percent_Identity=27.6595744680851, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1787894, Length=246, Percent_Identity=28.0487804878049, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1790861, Length=231, Percent_Identity=28.5714285714286, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1789808, Length=236, Percent_Identity=28.8135593220339, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786912, Length=225, Percent_Identity=28.8888888888889, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1789403, Length=198, Percent_Identity=30.3030303030303, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1790567, Length=342, Percent_Identity=27.1929824561404, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI87082128, Length=232, Percent_Identity=27.5862068965517, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790300, Length=230, Percent_Identity=26.9565217391304, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 65625; Mature: 65625
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLTLSILIILIFTLTIVSSLFLITINNQYIESSKNRLKNNNSFILKVIRNEDPKNIV CCCCHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHH NFIKNNYRDNDIRVTLLDHKGNVLVDSKENRVELENHNKREEIVNAKKNGEAYSVRYSNT HHHHCCCCCCCEEEEEEECCCCEEEECCCCCEECCCCCCHHHHHCCCCCCCEEEEEECCC RKVESLYFASKVNNDYIIRSAIDMKDIKLLEKKYSKYYISIILFSFVLSFLFSSRISMAM HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IKPIKNLEFVTSRIARGDFDRRVIINSEDEIGRLGRTFNAMADILENSLVEVRDKQNRLE HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AILKSMDSGVVAIDKEFKVIMINPYANKLFGIKRDIIGENLMDNIRDFELEKVLKDKEPG HHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC YKEIGILWPEKRTLRVKTTDIISKYDNIGTVAVVQDITDIKKLENMREQFVANVSHELKT CCCEEEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLTSIKGFSETLKYVDDKKNREKFLQIINDEADRLTRLINDILVLSNIEKQKQELIKEKI CHHHHCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC DLNELIEKVYCLVKKSAEDKNIKINIVGEKIPLLIGNKDKYNQMIINLVDNAIKYTEPNG CHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHEECCCCC YVSIGTKQDKGNIVFWVEDTGVGISEEHLDRIFERFYRVDKARSRAEGGTGLGLAIVKHI EEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VLSINGKIEVKSEPKKGTKFIVKIPLSII HHEECCEEEECCCCCCCCEEEEEECCCCC >Mature Secondary Structure MKKKLTLSILIILIFTLTIVSSLFLITINNQYIESSKNRLKNNNSFILKVIRNEDPKNIV CCCCHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHH NFIKNNYRDNDIRVTLLDHKGNVLVDSKENRVELENHNKREEIVNAKKNGEAYSVRYSNT HHHHCCCCCCCEEEEEEECCCCEEEECCCCCEECCCCCCHHHHHCCCCCCCEEEEEECCC RKVESLYFASKVNNDYIIRSAIDMKDIKLLEKKYSKYYISIILFSFVLSFLFSSRISMAM HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IKPIKNLEFVTSRIARGDFDRRVIINSEDEIGRLGRTFNAMADILENSLVEVRDKQNRLE HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AILKSMDSGVVAIDKEFKVIMINPYANKLFGIKRDIIGENLMDNIRDFELEKVLKDKEPG HHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC YKEIGILWPEKRTLRVKTTDIISKYDNIGTVAVVQDITDIKKLENMREQFVANVSHELKT CCCEEEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLTSIKGFSETLKYVDDKKNREKFLQIINDEADRLTRLINDILVLSNIEKQKQELIKEKI CHHHHCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC DLNELIEKVYCLVKKSAEDKNIKINIVGEKIPLLIGNKDKYNQMIINLVDNAIKYTEPNG CHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHEECCCCC YVSIGTKQDKGNIVFWVEDTGVGISEEHLDRIFERFYRVDKARSRAEGGTGLGLAIVKHI EEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VLSINGKIEVKSEPKKGTKFIVKIPLSII HHEECCEEEECCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]