| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is pstS
Identifier: 170755717
GI number: 170755717
Start: 2652369
End: 2653241
Strand: Reverse
Name: pstS
Synonym: CLD_2110
Alternate gene names: 170755717
Gene position: 2653241-2652369 (Counterclockwise)
Preceding gene: 170757594
Following gene: 170756588
Centisome position: 67.03
GC content: 31.39
Gene sequence:
>873_bases ATGAAAAGAAAAGGACTTAAATTAATAATATCAGCTTTAACAATTACTATGACCTTAGGAATATTGGCAGGTTGTGGTAA TAAACAAGAAAATAAGGAAGAAAGCAAAAAGAAAGCTATAAGTGGTAGCATAACAACATTAGGTTCCTCAGCATTGCAGC CTTTAGTTGAACAAGGAGCCAAACAATTTATGCAGAAAAATCCAGATGCTACTATAAATGTTCAAGGTGGAGGAAGTGGA GCTGGAATAAACCAGGTAGTTTCAGGCTCAGTTGAAATAGGAAACTCTGATGTAACAGCAGAATCAAAACTAAAAGATAA AAATCAAGTTTCATCTTTAGTAGATCATAAGGTTTGTGCCATAGGATTTGGCATGATAGTTAATAAAGAAGTAAAGGTAA ATTCTTTAACAAAAGAACAAATACAAAAAATATTCACAGGAGAGATTACTAACTGGAAAGAAGTTGGTGGTCAGGACGAA AAAATAAATGTTATAAATAGATCTAAATCATCAGGTACAAGAGCTACTTTTAAAGATACTGTAATGAATGGAAAGGATGA AAAAGAAGGGTTAGGTACAACTCAAGACTCTAGTGGAAGTGTTGTAAAAGCCATAGGTCAAACAAAGGGAAGTATAAGTT ATGTAGCTTTTTCACATCTTAACGATGAAGTAAAAGCTTTAAAAATAAATAATGTAGAACCAACAAAGGAAAACATAATA GCTAAAAAATATGATTTTTGGTCTTATGAACATATGTATACAAAGGGAGAACCAGAAGGATTAACAAAAGCTTTTATAGA CTATATGATCAGTGATGAAGCTAAGCCATTAATAGAAAGATTAAAATATATACCAGCTAGTGATATTAAGTAA
Upstream 100 bases:
>100_bases TAACTTTACTATAATAATTGTTTAACTTACATGATTTAAAATATACACTATAATGATTAAAAAACATAAAATAAAAAATC TTGAACGGAGGTTTTTATTA
Downstream 100 bases:
>100_bases TTATTATAGCTTAGTAAAGCTTTATTATTAAATGGACTTTTAGCATTTTAATTTTTATAAAAATTTATGCAAACTTAAAG TTTATTTGGTGTAAGGTAAA
Product: phosphate ABC transporter, phosphate-binding protein
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGAKQFMQKNPDATINVQGGGSG AGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCAIGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDE KINVINRSKSSGTRATFKDTVMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK
Sequences:
>Translated_290_residues MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGAKQFMQKNPDATINVQGGGSG AGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCAIGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDE KINVINRSKSSGTRATFKDTVMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK >Mature_290_residues MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGAKQFMQKNPDATINVQGGGSG AGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCAIGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDE KINVINRSKSSGTRATFKDTVMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31410; Mature: 31410
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH KQFMQKNPDATINVQGGGSGAGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCA HHHHHCCCCCEEEEECCCCCCCHHHHHCCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHH IGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDEKINVINRSKSSGTRATFKDT HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCCCCCHHHHH VMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII HCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHH AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK HHHCCCCCHHHEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH KQFMQKNPDATINVQGGGSGAGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCA HHHHHCCCCCEEEEECCCCCCCHHHHHCCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHH IGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDEKINVINRSKSSGTRATFKDT HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCCCCCHHHHH VMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII HCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHH AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK HHHCCCCCHHHEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]