Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is pstS

Identifier: 170755717

GI number: 170755717

Start: 2652369

End: 2653241

Strand: Reverse

Name: pstS

Synonym: CLD_2110

Alternate gene names: 170755717

Gene position: 2653241-2652369 (Counterclockwise)

Preceding gene: 170757594

Following gene: 170756588

Centisome position: 67.03

GC content: 31.39

Gene sequence:

>873_bases
ATGAAAAGAAAAGGACTTAAATTAATAATATCAGCTTTAACAATTACTATGACCTTAGGAATATTGGCAGGTTGTGGTAA
TAAACAAGAAAATAAGGAAGAAAGCAAAAAGAAAGCTATAAGTGGTAGCATAACAACATTAGGTTCCTCAGCATTGCAGC
CTTTAGTTGAACAAGGAGCCAAACAATTTATGCAGAAAAATCCAGATGCTACTATAAATGTTCAAGGTGGAGGAAGTGGA
GCTGGAATAAACCAGGTAGTTTCAGGCTCAGTTGAAATAGGAAACTCTGATGTAACAGCAGAATCAAAACTAAAAGATAA
AAATCAAGTTTCATCTTTAGTAGATCATAAGGTTTGTGCCATAGGATTTGGCATGATAGTTAATAAAGAAGTAAAGGTAA
ATTCTTTAACAAAAGAACAAATACAAAAAATATTCACAGGAGAGATTACTAACTGGAAAGAAGTTGGTGGTCAGGACGAA
AAAATAAATGTTATAAATAGATCTAAATCATCAGGTACAAGAGCTACTTTTAAAGATACTGTAATGAATGGAAAGGATGA
AAAAGAAGGGTTAGGTACAACTCAAGACTCTAGTGGAAGTGTTGTAAAAGCCATAGGTCAAACAAAGGGAAGTATAAGTT
ATGTAGCTTTTTCACATCTTAACGATGAAGTAAAAGCTTTAAAAATAAATAATGTAGAACCAACAAAGGAAAACATAATA
GCTAAAAAATATGATTTTTGGTCTTATGAACATATGTATACAAAGGGAGAACCAGAAGGATTAACAAAAGCTTTTATAGA
CTATATGATCAGTGATGAAGCTAAGCCATTAATAGAAAGATTAAAATATATACCAGCTAGTGATATTAAGTAA

Upstream 100 bases:

>100_bases
TAACTTTACTATAATAATTGTTTAACTTACATGATTTAAAATATACACTATAATGATTAAAAAACATAAAATAAAAAATC
TTGAACGGAGGTTTTTATTA

Downstream 100 bases:

>100_bases
TTATTATAGCTTAGTAAAGCTTTATTATTAAATGGACTTTTAGCATTTTAATTTTTATAAAAATTTATGCAAACTTAAAG
TTTATTTGGTGTAAGGTAAA

Product: phosphate ABC transporter, phosphate-binding protein

Products: NA

Alternate protein names: PBP 1 [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGAKQFMQKNPDATINVQGGGSG
AGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCAIGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDE
KINVINRSKSSGTRATFKDTVMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII
AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK

Sequences:

>Translated_290_residues
MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGAKQFMQKNPDATINVQGGGSG
AGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCAIGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDE
KINVINRSKSSGTRATFKDTVMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII
AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK
>Mature_290_residues
MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGAKQFMQKNPDATINVQGGGSG
AGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCAIGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDE
KINVINRSKSSGTRATFKDTVMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII
AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31410; Mature: 31410

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH
KQFMQKNPDATINVQGGGSGAGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCA
HHHHHCCCCCEEEEECCCCCCCHHHHHCCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHH
IGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDEKINVINRSKSSGTRATFKDT
HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCCCCCHHHHH
VMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII
HCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHH
AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK
HHHCCCCCHHHEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKRKGLKLIISALTITMTLGILAGCGNKQENKEESKKKAISGSITTLGSSALQPLVEQGA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH
KQFMQKNPDATINVQGGGSGAGINQVVSGSVEIGNSDVTAESKLKDKNQVSSLVDHKVCA
HHHHHCCCCCEEEEECCCCCCCHHHHHCCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHH
IGFGMIVNKEVKVNSLTKEQIQKIFTGEITNWKEVGGQDEKINVINRSKSSGTRATFKDT
HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCCCCCHHHHH
VMNGKDEKEGLGTTQDSSGSVVKAIGQTKGSISYVAFSHLNDEVKALKINNVEPTKENII
HCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHH
AKKYDFWSYEHMYTKGEPEGLTKAFIDYMISDEAKPLIERLKYIPASDIK
HHHCCCCCHHHEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]