| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757504
Identifier: 170757504
GI number: 170757504
Start: 107267
End: 108772
Strand: Direct
Name: 170757504
Synonym: CLD_0710
Alternate gene names: NA
Gene position: 107267-108772 (Clockwise)
Preceding gene: 170755122
Following gene: 170756516
Centisome position: 2.71
GC content: 22.58
Gene sequence:
>1506_bases ATGAAATTTTTAATAGCATCAATAATAGGCGGAATAATAGGTTATCTTACTAATTGGATAGCTATAAAGATGTTATTTAG ACCCTATGAAGAAAAAAGAATATTTGGTATGAAGGTTCCATTTACACCAGGACTTATTCCAAAGGAAAAAATTAGAATAG CAAAAAGTGTAGGTAATGCTATAGGAGAGCATTTATTATCTAGTGAAATTATTGTAAAGTCTTTATGTAGTGAAAATATG AATAATAGACTTAAGATTTGGATAAGACAAAAGGTATATTCTTTAATTACAACCAAAAAAACTTTGGAAGATAAATTTAA AGAGTTTTTAGATTATAAATATGATTATTTTATAAACGCTTTAAAGGCAAGTTTGAGTAAGTTAACTATTAACAATTTAA AAAATGAAAAGAATAGAGACAAAGTAAAACAAATTATAAAAATTAAATTAGACAAAATATTATCTCTTAAGGGTAACCAT ATTACTAATAATTACATATATAAACAAATAAAAAGAGGTTTAATAAATAATACAAATGAGTATTTAAAATCAAATAATTT TAAAGAGGTTTTAAAAAGTTTAATTATAGAAAATATAAAAGATGAGGAAGTTTTAAATAAAAAAATAGGTAATATAATTC CTAATAACTTTACCTCAAATATAAAAGTATATGTTTATAGAAAGAAAGATAATTTGTCAAATTACATAAATGAAATGCTT AAAGAAGAAGGAAATATAAATAAGTTAAAAAATATATTAAGAGAAGTTATAAATAATAATGTAAATTCTTTTATGTCAAT GTTTATAGATGTAAATGCTATATCAGATAAAACAATTGTATTTTTAGAAGGATACTTACAAAGAGAAGAAACTAAAGAGG AAATGGTATCCTTAGTGAATAAGAGCATAGATAAAGTTTTAGATACAAATTTACAAGATATTATAGAAAATATACCAGAA AATAGCAAGAGTGTAATTATGGATGAAATGGTGGATACATTATGCCAAAAACTCCAAAATACAGAGATGATTTTAGAAAT AATAGAAAAAATAGAAAGTCATTTTCAGGAAAAAAATTCTTTAAATGACATAATAGAAAAGATAAATATAAATCCATATA AATTTATAAATAATATTATAGATAAATTTATAGATAGTGAAAATTTTGAGGCTATAATTAATAATTTGATAAGTGATATA ATTGAAAACTTTATGAAAACACCTATATATGAATTAACTCAAGGGAATGAAGAAGGAATATTGAATACTAGCTACCAAAT GGTAAAAAATGTATATAATAGATTTATAGAGAATCAAGCAGAAGAGGTTATATCAATCCTTGATATATCTAGTATTGTAG AAGATAGAATAAATGAGTTTGATGTTTATTTGGCTGAAGAAATAATACTAGAAATATCTAGCAAAGAGTTAAAAGCCATA ACCTGGTTGGGTGGATTATTAGGTGCTTTAATAGGAATTTTATCTCCTATATTAAGTAAAATATAG
Upstream 100 bases:
>100_bases ATCCAGGGACATAGCCGCTCTTTACTCCCACTTTGAAGAAGATGGGAGTATTAGAGCGGGTAGTCATCGGATAAAATATT AAAGTGAGGAGTTTGAAAAA
Downstream 100 bases:
>100_bases TTGATTTTCCGGTCAGTTTTAATTTTTGAAGATAATGGTTTTGACTAATTGAAAAATTTTAATTATAATATATAGAAAAT GAAAAATTATTAAGAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKIRIAKSVGNAIGEHLLSSEIIVKSLCSENM NNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINALKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNH ITNNYIYKQIKRGLINNTNEYLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVNKSIDKVLDTNLQDIIENIPE NSKSVIMDEMVDTLCQKLQNTEMILEIIEKIESHFQEKNSLNDIIEKININPYKFINNIIDKFIDSENFEAIINNLISDI IENFMKTPIYELTQGNEEGILNTSYQMVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI TWLGGLLGALIGILSPILSKI
Sequences:
>Translated_501_residues MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKIRIAKSVGNAIGEHLLSSEIIVKSLCSENM NNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINALKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNH ITNNYIYKQIKRGLINNTNEYLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVNKSIDKVLDTNLQDIIENIPE NSKSVIMDEMVDTLCQKLQNTEMILEIIEKIESHFQEKNSLNDIIEKININPYKFINNIIDKFIDSENFEAIINNLISDI IENFMKTPIYELTQGNEEGILNTSYQMVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI TWLGGLLGALIGILSPILSKI >Mature_501_residues MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKIRIAKSVGNAIGEHLLSSEIIVKSLCSENM NNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINALKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNH ITNNYIYKQIKRGLINNTNEYLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVNKSIDKVLDTNLQDIIENIPE NSKSVIMDEMVDTLCQKLQNTEMILEIIEKIESHFQEKNSLNDIIEKININPYKFINNIIDKFIDSENFEAIINNLISDI IENFMKTPIYELTQGNEEGILNTSYQMVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI TWLGGLLGALIGILSPILSKI
Specific function: Unknown
COG id: COG4399
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0754 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007383 - InterPro: IPR016991 [H]
Pfam domain/function: PF04286 DUF445 [H]
EC number: NA
Molecular weight: Translated: 58055; Mature: 58055
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKIRIAKSVGNA CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHH IGEHLLSSEIIVKSLCSENMNNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNHITNNYIYKQIKRGLINNTNE HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH YLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML HHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVN HCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH KSIDKVLDTNLQDIIENIPENSKSVIMDEMVDTLCQKLQNTEMILEIIEKIESHFQEKNS HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LNDIIEKININPYKFINNIIDKFIDSENFEAIINNLISDIIENFMKTPIYELTQGNEEGI HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC LNTSYQMVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWLGGLLGALIGILSPILSKI HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGLIPKEKIRIAKSVGNA CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHH IGEHLLSSEIIVKSLCSENMNNRLKIWIRQKVYSLITTKKTLEDKFKEFLDYKYDYFINA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNHITNNYIYKQIKRGLINNTNE HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH YLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIKVYVYRKKDNLSNYINEML HHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH KEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVFLEGYLQREETKEEMVSLVN HCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH KSIDKVLDTNLQDIIENIPENSKSVIMDEMVDTLCQKLQNTEMILEIIEKIESHFQEKNS HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LNDIIEKININPYKFINNIIDKFIDSENFEAIINNLISDIIENFMKTPIYELTQGNEEGI HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC LNTSYQMVKNVYNRFIENQAEEVISILDISSIVEDRINEFDVYLAEEIILEISSKELKAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWLGGLLGALIGILSPILSKI HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA