Click here to switch to the map view.

The map label for this gene is rfbP [H]

Identifier: 170757491

GI number: 170757491

Start: 2865996

End: 2866673

Strand: Reverse

Name: rfbP [H]

Synonym: CLD_1879

Alternate gene names: 170757491

Gene position: 2866673-2865996 (Counterclockwise)

Preceding gene: 170757290

Following gene: 170755432

Centisome position: 72.42

GC content: 29.94

Gene sequence:

>678_bases
ATGCAGGAAATAGAAAGAGAATTAGACGATAGTCATATAAAAACTAAAAAACTTGAACTAGTGGAGAATAAATTTTTTTA
TGATTTATTAAAAAGAACCTTTGATTTAGCCAGTTCTTTATGCGGGTTAATAGTTTTTTCTCCTTTGTTTTTAATTATTG
CAATGCTGATTAAATTAGATTCTAAAGGACCAGCATTTTTTTCACATATAAGGTTGGGAAAACAAGGTTCAAAGATAAAA
GTATATAAATTTAGAACTATGAAACCTAATGCTGAAGAATTATTGAAAAACTTGACACCAGAACAAAAACGAGAATTTCA
GGAAAATTTTAAGTTAGAAGATGACCCTAGAATAACAAAAATAGGTAGTTTTTTAAGAAAAAGTAGTTTAGATGAATTAC
CGCAATTATTAAATATATTTATAGGAAATATGACTGTAGTAGGACCTAGGCCCATAGTAGAAAAAGAAATTCAAAAATAT
GGTGAATGTGGGGACAAGCTTCTAATGGTTAAGCCGGGACTTACAGGAATGTGGCAGGCTAATGGAAGAAGTGATACTAC
ATATGAAGAGAGAGTTGAAATGGATATGGATTACATAGACAATAGAAATTTTTGGCTAGATATTAAGATTATACTTCAAA
CAGCTATAGCGGTAGTTAGGAAAAAAGGAGCAAGATAA

Upstream 100 bases:

>100_bases
ATAATATGACAATAAATTGTAAAATATAATATGATTTCTGATTTCATAGAAATATGTATATAAAAATGATAAGAAGAAGA
AAGCTAAAGGGAGGGGAATT

Downstream 100 bases:

>100_bases
GAATAATTATACATATAAATAATAGTTTATCAAAAATTTTCATATAAAAGTAGATAAAATACTAGCAAACAAATATTAAT
ACTTTATCAAGGAGGAAAGA

Product: putative undecaprenyl-phosphate galactosephosphotransferase

Products: NA

Alternate protein names: Galactosyl-P-P-undecaprenol synthase [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLIVFSPLFLIIAMLIKLDSKGPAFFSHIRLGKQGSKIK
VYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITKIGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIQKY
GECGDKLLMVKPGLTGMWQANGRSDTTYEERVEMDMDYIDNRNFWLDIKIILQTAIAVVRKKGAR

Sequences:

>Translated_225_residues
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLIVFSPLFLIIAMLIKLDSKGPAFFSHIRLGKQGSKIK
VYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITKIGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIQKY
GECGDKLLMVKPGLTGMWQANGRSDTTYEERVEMDMDYIDNRNFWLDIKIILQTAIAVVRKKGAR
>Mature_225_residues
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLIVFSPLFLIIAMLIKLDSKGPAFFSHIRLGKQGSKIK
VYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITKIGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIQKY
GECGDKLLMVKPGLTGMWQANGRSDTTYEERVEMDMDYIDNRNFWLDIKIILQTAIAVVRKKGAR

Specific function: Is responsible for transferring galactose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O-polysaccharide biosynthesis [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=204, Percent_Identity=38.7254901960784, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: =2.7.8.6 [H]

Molecular weight: Translated: 26094; Mature: 26094

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLIVFSPLFLIIAMLIKLD
CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SKGPAFFSHIRLGKQGSKIKVYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITK
CCCCHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHH
IGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIQKYGECGDKLLMVKPGLTGMWQA
HHHHHHHCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEC
NGRSDTTYEERVEMDMDYIDNRNFWLDIKIILQTAIAVVRKKGAR
CCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLIVFSPLFLIIAMLIKLD
CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SKGPAFFSHIRLGKQGSKIKVYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITK
CCCCHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHH
IGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIQKYGECGDKLLMVKPGLTGMWQA
HHHHHHHCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEC
NGRSDTTYEERVEMDMDYIDNRNFWLDIKIILQTAIAVVRKKGAR
CCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]