| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757451
Identifier: 170757451
GI number: 170757451
Start: 1446185
End: 1446787
Strand: Direct
Name: 170757451
Synonym: CLD_3257
Alternate gene names: NA
Gene position: 1446185-1446787 (Clockwise)
Preceding gene: 170757493
Following gene: 170756753
Centisome position: 36.54
GC content: 23.88
Gene sequence:
>603_bases ATGGGCCCGCAATTTATAATTCATAAAGATAATTTAACGGGAATCTTTAAAGATGTAAATGTGTCAGCAGTAGCTATAAA TTCTAAATATGGAAAAGAAGAAGAGCTTAATAAAGATATAAAAAATATTATATCTAAAGACACTAAAGTAGAATTAAAAT CTTTTAAGGAAGTATATAATAAAACCAAAAAGGAAAAGCAGAATATAGAGCTTATTGGTTATTCTATAGTTATAACTATT GCTACTATAGGTATATTAAATTTTATAAATACTATAATTACAGGAATTATAAGCAGAAAAAAGGAATTTGGAATGTTAAA AGCTATAGGAACTACGGATAACCAGTTAAAGTCATTATTATTAAAGGAAGGATTCTATTATTTAGGTATAGCTTGTATTT TAGCAGGTATTTTAGGAAATTTACTAGGATATTTTTTATTTACTTTATTTAAAAAAGTGGCTAGCTATGCAATATATCAT TTCCCAATAATTCAAACTATAAGTATGGTATTCATAGTATTTGTTATAGAATATATAGTGTTTAACATATCTATAAATTC TATAACAAAAAAGTCTATTGTAGATCAAATAAGATGTGATTAA
Upstream 100 bases:
>100_bases TGATAAAGAAGGTAGAAAAATTTATGAGGGTAAAAAAACTATTTATAAATTTAAAATAGCAGCTATAGTTTCATCTAGAG ATTTGGATATGGGGTGGGTA
Downstream 100 bases:
>100_bases TATATTTAATATTTTTTATAAGTAAAAAGTTTATTAAAATGAAAAATATAAAGAGTATTTTTGAAGAATATGAGTAATAT TTCTTTTAAAAATACTTTTT
Product: ABC transporter, permease protein
Products: NA
Alternate protein names: ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Permease
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MGPQFIIHKDNLTGIFKDVNVSAVAINSKYGKEEELNKDIKNIISKDTKVELKSFKEVYNKTKKEKQNIELIGYSIVITI ATIGILNFINTIITGIISRKKEFGMLKAIGTTDNQLKSLLLKEGFYYLGIACILAGILGNLLGYFLFTLFKKVASYAIYH FPIIQTISMVFIVFVIEYIVFNISINSITKKSIVDQIRCD
Sequences:
>Translated_200_residues MGPQFIIHKDNLTGIFKDVNVSAVAINSKYGKEEELNKDIKNIISKDTKVELKSFKEVYNKTKKEKQNIELIGYSIVITI ATIGILNFINTIITGIISRKKEFGMLKAIGTTDNQLKSLLLKEGFYYLGIACILAGILGNLLGYFLFTLFKKVASYAIYH FPIIQTISMVFIVFVIEYIVFNISINSITKKSIVDQIRCD >Mature_199_residues GPQFIIHKDNLTGIFKDVNVSAVAINSKYGKEEELNKDIKNIISKDTKVELKSFKEVYNKTKKEKQNIELIGYSIVITIA TIGILNFINTIITGIISRKKEFGMLKAIGTTDNQLKSLLLKEGFYYLGIACILAGILGNLLGYFLFTLFKKVASYAIYHF PIIQTISMVFIVFVIEYIVFNISINSITKKSIVDQIRCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22592; Mature: 22461
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPQFIIHKDNLTGIFKDVNVSAVAINSKYGKEEELNKDIKNIISKDTKVELKSFKEVYN CCCCEEEECCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH KTKKEKQNIELIGYSIVITIATIGILNFINTIITGIISRKKEFGMLKAIGTTDNQLKSLL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LKEGFYYLGIACILAGILGNLLGYFLFTLFKKVASYAIYHFPIIQTISMVFIVFVIEYIV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNISINSITKKSIVDQIRCD HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GPQFIIHKDNLTGIFKDVNVSAVAINSKYGKEEELNKDIKNIISKDTKVELKSFKEVYN CCCEEEECCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH KTKKEKQNIELIGYSIVITIATIGILNFINTIITGIISRKKEFGMLKAIGTTDNQLKSLL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LKEGFYYLGIACILAGILGNLLGYFLFTLFKKVASYAIYHFPIIQTISMVFIVFVIEYIV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNISINSITKKSIVDQIRCD HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA