| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757441
Identifier: 170757441
GI number: 170757441
Start: 1454771
End: 1455898
Strand: Direct
Name: 170757441
Synonym: CLD_3242
Alternate gene names: NA
Gene position: 1454771-1455898 (Clockwise)
Preceding gene: 170755648
Following gene: 170757426
Centisome position: 36.75
GC content: 27.93
Gene sequence:
>1128_bases ATGAATTTTATAGACATATTAAAAAGAAATATAAAAAAATTAACTAAATCCGATGTTAAAGTAATAATTTTAACTATTAT AGTTATAGTTAGTATGTTAATGCCCAGTAACTATATAAGAAAGGAAGCTATACATGGAAAGATTACAGAAGTAGAAAATA AGGAAGGAGAAAAAGGACAACTTTCTAGAAGTAAAGTAAATGTAAAAATTTTAAATAGTAAATATAAAGATAAAGTAATA GATATGGACAATTTAGTTAGTGATAAAACTTATCATGAAACCTATGCCAAAAAGGGAAATGAGGTATTAATAAATATAGA GGAAGATGATAAAGGTAACATAAAAAAAGCATATATATATGAAGTTGTAAGGTATAAATATTTGAAAGGTATAATTATAT TATTTTTAGTTTTACTAAGTCTTTTAGGTGGAATGCAGGGAATACGCTCAGTTTTAGCATTACTTATAACTACCTATGCA GTACTTAAAGTCCTTATACCACTAATAATGGTAGGATTTAATCCGATATTAGTTTCTATAATCATATGTATAGGAGTTGG TATCTTAAATCTACTTATAATAAGTGGAAAAAACAAAAAAAGTTATGCTGCTATTATAGGAACTCTAGGCGGAGTTATGG TGGCAGGAATTATAGCTCTTATAAGTAGTAATATACTTCAAGTAATAGGTCTTACAGATGAAGAAGCCCAAATGCTTATA TATATAACTGGAAATCCAAAATTTAATTTTAGAGGATTATTATTTTCAGGAATTCTTATGGGAGCTTTAGGTGCAGTAAT GGATATAAGTATGTCTATAGCATCATCTATGAAAGAAGTAAAAATAAATAATCCAGACATAAGTAAAAAACAACTTGTAA AAGCAGGATTCAATGTAGGAAGGGATATAATGGGAACCATGGCAAACACTCTTATTTTAGCCTATGCAGGAGGAGCTATG TATACCTTATTACTTATATCTTCTTATAAGTTACCTTTTGAAAGAATGTTAAATCAAGATGTAATGGCAGCAGAAATAAT ACAAGCTCTATGTGGTAGCATAGGACTCATATTTACAATTCCTATAACTACATTGGCTGTAAGTCTAATAGGTATAGATA AAGAATGA
Upstream 100 bases:
>100_bases AAATTTGCATATTAAAAATAAATATTATATTTTAGTATTAAATAATATAAATATATTAAAAGATTAGTTTATTAAAGGAA TTATTACAGGAGATGAGGAA
Downstream 100 bases:
>100_bases TCGGATACCATTCATGGATTATAATGTAATAATTAAGGAAACTGTTCATAAATTTTAGTTATAATTTAAAGTAATTAAAA AGTATAGTTCATTAAACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Multitransmembrane Protein; YibE/F-Like Protein; Integral Membrane Protein; Lipoprotein; Yibe/F Family Protein; Multitransmembrane Protein-Like Protein; YibE/F-Like Family Protein; Multitransmembrane Protein-Like; Conserved Multi-Transmembrane Protein
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQLSRSKVNVKILNSKYKDKVI DMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIYEVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYA VLKVLIPLIMVGFNPILVSIIICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVGRDIMGTMANTLILAYAGGAM YTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTIPITTLAVSLIGIDKE
Sequences:
>Translated_375_residues MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQLSRSKVNVKILNSKYKDKVI DMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIYEVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYA VLKVLIPLIMVGFNPILVSIIICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVGRDIMGTMANTLILAYAGGAM YTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTIPITTLAVSLIGIDKE >Mature_375_residues MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQLSRSKVNVKILNSKYKDKVI DMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIYEVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYA VLKVLIPLIMVGFNPILVSIIICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVGRDIMGTMANTLILAYAGGAM YTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTIPITTLAVSLIGIDKE
Specific function: Unknown
COG id: COG5438
COG function: function code S; Predicted multitransmembrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41067; Mature: 41067
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCC LSRSKVNVKILNSKYKDKVIDMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIY CHHHHEEEEEECCHHHHHHCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH EVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYAVLKVLIPLIMVGFNPILVSI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVG EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC RDIMGTMANTLILAYAGGAMYTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTI HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCHHEEH PITTLAVSLIGIDKE HHHHHHHHHHCCCCC >Mature Secondary Structure MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCC LSRSKVNVKILNSKYKDKVIDMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIY CHHHHEEEEEECCHHHHHHCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH EVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYAVLKVLIPLIMVGFNPILVSI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVG EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC RDIMGTMANTLILAYAGGAMYTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTI HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCHHEEH PITTLAVSLIGIDKE HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA