Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757441

Identifier: 170757441

GI number: 170757441

Start: 1454771

End: 1455898

Strand: Direct

Name: 170757441

Synonym: CLD_3242

Alternate gene names: NA

Gene position: 1454771-1455898 (Clockwise)

Preceding gene: 170755648

Following gene: 170757426

Centisome position: 36.75

GC content: 27.93

Gene sequence:

>1128_bases
ATGAATTTTATAGACATATTAAAAAGAAATATAAAAAAATTAACTAAATCCGATGTTAAAGTAATAATTTTAACTATTAT
AGTTATAGTTAGTATGTTAATGCCCAGTAACTATATAAGAAAGGAAGCTATACATGGAAAGATTACAGAAGTAGAAAATA
AGGAAGGAGAAAAAGGACAACTTTCTAGAAGTAAAGTAAATGTAAAAATTTTAAATAGTAAATATAAAGATAAAGTAATA
GATATGGACAATTTAGTTAGTGATAAAACTTATCATGAAACCTATGCCAAAAAGGGAAATGAGGTATTAATAAATATAGA
GGAAGATGATAAAGGTAACATAAAAAAAGCATATATATATGAAGTTGTAAGGTATAAATATTTGAAAGGTATAATTATAT
TATTTTTAGTTTTACTAAGTCTTTTAGGTGGAATGCAGGGAATACGCTCAGTTTTAGCATTACTTATAACTACCTATGCA
GTACTTAAAGTCCTTATACCACTAATAATGGTAGGATTTAATCCGATATTAGTTTCTATAATCATATGTATAGGAGTTGG
TATCTTAAATCTACTTATAATAAGTGGAAAAAACAAAAAAAGTTATGCTGCTATTATAGGAACTCTAGGCGGAGTTATGG
TGGCAGGAATTATAGCTCTTATAAGTAGTAATATACTTCAAGTAATAGGTCTTACAGATGAAGAAGCCCAAATGCTTATA
TATATAACTGGAAATCCAAAATTTAATTTTAGAGGATTATTATTTTCAGGAATTCTTATGGGAGCTTTAGGTGCAGTAAT
GGATATAAGTATGTCTATAGCATCATCTATGAAAGAAGTAAAAATAAATAATCCAGACATAAGTAAAAAACAACTTGTAA
AAGCAGGATTCAATGTAGGAAGGGATATAATGGGAACCATGGCAAACACTCTTATTTTAGCCTATGCAGGAGGAGCTATG
TATACCTTATTACTTATATCTTCTTATAAGTTACCTTTTGAAAGAATGTTAAATCAAGATGTAATGGCAGCAGAAATAAT
ACAAGCTCTATGTGGTAGCATAGGACTCATATTTACAATTCCTATAACTACATTGGCTGTAAGTCTAATAGGTATAGATA
AAGAATGA

Upstream 100 bases:

>100_bases
AAATTTGCATATTAAAAATAAATATTATATTTTAGTATTAAATAATATAAATATATTAAAAGATTAGTTTATTAAAGGAA
TTATTACAGGAGATGAGGAA

Downstream 100 bases:

>100_bases
TCGGATACCATTCATGGATTATAATGTAATAATTAAGGAAACTGTTCATAAATTTTAGTTATAATTTAAAGTAATTAAAA
AGTATAGTTCATTAAACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Multitransmembrane Protein; YibE/F-Like Protein; Integral Membrane Protein; Lipoprotein; Yibe/F Family Protein; Multitransmembrane Protein-Like Protein; YibE/F-Like Family Protein; Multitransmembrane Protein-Like; Conserved Multi-Transmembrane Protein

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQLSRSKVNVKILNSKYKDKVI
DMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIYEVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYA
VLKVLIPLIMVGFNPILVSIIICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI
YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVGRDIMGTMANTLILAYAGGAM
YTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTIPITTLAVSLIGIDKE

Sequences:

>Translated_375_residues
MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQLSRSKVNVKILNSKYKDKVI
DMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIYEVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYA
VLKVLIPLIMVGFNPILVSIIICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI
YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVGRDIMGTMANTLILAYAGGAM
YTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTIPITTLAVSLIGIDKE
>Mature_375_residues
MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQLSRSKVNVKILNSKYKDKVI
DMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIYEVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYA
VLKVLIPLIMVGFNPILVSIIICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI
YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVGRDIMGTMANTLILAYAGGAM
YTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTIPITTLAVSLIGIDKE

Specific function: Unknown

COG id: COG5438

COG function: function code S; Predicted multitransmembrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41067; Mature: 41067

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCC
LSRSKVNVKILNSKYKDKVIDMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIY
CHHHHEEEEEECCHHHHHHCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH
EVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYAVLKVLIPLIMVGFNPILVSI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVG
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
RDIMGTMANTLILAYAGGAMYTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCHHEEH
PITTLAVSLIGIDKE
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MNFIDILKRNIKKLTKSDVKVIILTIIVIVSMLMPSNYIRKEAIHGKITEVENKEGEKGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCC
LSRSKVNVKILNSKYKDKVIDMDNLVSDKTYHETYAKKGNEVLINIEEDDKGNIKKAYIY
CHHHHEEEEEECCHHHHHHCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH
EVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYAVLKVLIPLIMVGFNPILVSI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IICIGVGILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALISSNILQVIGLTDEEAQMLI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
YITGNPKFNFRGLLFSGILMGALGAVMDISMSIASSMKEVKINNPDISKKQLVKAGFNVG
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
RDIMGTMANTLILAYAGGAMYTLLLISSYKLPFERMLNQDVMAAEIIQALCGSIGLIFTI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCHHEEH
PITTLAVSLIGIDKE
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA