| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757424
Identifier: 170757424
GI number: 170757424
Start: 1944582
End: 1945136
Strand: Reverse
Name: 170757424
Synonym: CLD_2818
Alternate gene names: NA
Gene position: 1945136-1944582 (Counterclockwise)
Preceding gene: 170755883
Following gene: 170754289
Centisome position: 49.14
GC content: 24.5
Gene sequence:
>555_bases TTGAAATTTGAAAAAATATTGCAAATAGTTTTGGTAATAGCTATAGTTATTCAGTTTTTTTATTCTTTTATATTAGGACG AAAACAAGATAAAAATATTGGTAATAAATTAATGACCTTAAAGAGAAGTGCAATGAAACAAAGTTCTATATTATTGCTTA TGATATGCATTGTATTTTATATGCTATATGCTTTTGTAAAGGGGACTGCTTCTAATACAGGGTTACTTATAATCATATAT TTTCTAATAAGTATATATGATTTCACCAAATTAAAAATAGTAACAGATAAAGGTATTGGAAATAAAAGTTTATATAACAA TAGTATATATAATTTTGTATACTGGGAAGATATAACAAGATGGGAATGGCATCCTAAACATCCTAATCTTTTATTTTTTA CTTTTTCAAACAAAAAAGGAAATGCAGATAGAAGAGATTGGGATATTCCATCTTCAGATAAAGAAAATTTTGAATCCATA CTAAATAAATATGTAAAGCATGCTTTTGTAGATAGCACTTTAGAAAATATGAACCGTAATTCTGAAAAAAAGTAA
Upstream 100 bases:
>100_bases AAAAACTTTAACAATTAAAAATAAAAGGACTTTTATTTTTAATTGTAGAATATATTAAAAATGCACTTAAAGAATTTTAC TATATACTGGAGGGATTCCT
Downstream 100 bases:
>100_bases ATAAACATATTAATCTAAAACTAAAAATAAAATTATATTATAATCAAACTAATATTATATCTATATTATACTTTTTAATA TTTTCTTAAATTAATAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKFEKILQIVLVIAIVIQFFYSFILGRKQDKNIGNKLMTLKRSAMKQSSILLLMICIVFYMLYAFVKGTASNTGLLIIIY FLISIYDFTKLKIVTDKGIGNKSLYNNSIYNFVYWEDITRWEWHPKHPNLLFFTFSNKKGNADRRDWDIPSSDKENFESI LNKYVKHAFVDSTLENMNRNSEKK
Sequences:
>Translated_184_residues MKFEKILQIVLVIAIVIQFFYSFILGRKQDKNIGNKLMTLKRSAMKQSSILLLMICIVFYMLYAFVKGTASNTGLLIIIY FLISIYDFTKLKIVTDKGIGNKSLYNNSIYNFVYWEDITRWEWHPKHPNLLFFTFSNKKGNADRRDWDIPSSDKENFESI LNKYVKHAFVDSTLENMNRNSEKK >Mature_184_residues MKFEKILQIVLVIAIVIQFFYSFILGRKQDKNIGNKLMTLKRSAMKQSSILLLMICIVFYMLYAFVKGTASNTGLLIIIY FLISIYDFTKLKIVTDKGIGNKSLYNNSIYNFVYWEDITRWEWHPKHPNLLFFTFSNKKGNADRRDWDIPSSDKENFESI LNKYVKHAFVDSTLENMNRNSEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21709; Mature: 21709
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFEKILQIVLVIAIVIQFFYSFILGRKQDKNIGNKLMTLKRSAMKQSSILLLMICIVFY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLYAFVKGTASNTGLLIIIYFLISIYDFTKLKIVTDKGIGNKSLYNNSIYNFVYWEDITR HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCEEEEEECCCCC WEWHPKHPNLLFFTFSNKKGNADRRDWDIPSSDKENFESILNKYVKHAFVDSTLENMNRN CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SEKK CCCC >Mature Secondary Structure MKFEKILQIVLVIAIVIQFFYSFILGRKQDKNIGNKLMTLKRSAMKQSSILLLMICIVFY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLYAFVKGTASNTGLLIIIYFLISIYDFTKLKIVTDKGIGNKSLYNNSIYNFVYWEDITR HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCEEEEEECCCCC WEWHPKHPNLLFFTFSNKKGNADRRDWDIPSSDKENFESILNKYVKHAFVDSTLENMNRN CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SEKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA