| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757383
Identifier: 170757383
GI number: 170757383
Start: 2328288
End: 2330021
Strand: Reverse
Name: 170757383
Synonym: CLD_2442
Alternate gene names: NA
Gene position: 2330021-2328288 (Counterclockwise)
Preceding gene: 170754278
Following gene: 170756321
Centisome position: 58.87
GC content: 31.14
Gene sequence:
>1734_bases ATGACAGAAGAACAACAAAATAGATATTTATTATTTAAATATCTTACAGAACAGTTTACTATTGCTGGGGCTGATGATCC AGAGGAAAAAGCTAAAGAAATGATATTAAATAATTCTAGTAATTTATTTGGCTATCATGGTTTAGCTTGGCAGTTAGGAA AATTGAATATGGAGTTCTTTTGTATGTACTTTCTACAAAATACTTTTTTACCTAAAGAAAATAATGCAGCGGCTCCTATA GCTAAAGTCCATAAAGAAATATGGAGTGATATAGAAAACGCTATTATTGGTGAAGGTGCTGACCAGATAGGAAGAATATT ACCACGTGGTACTGGTAAATCTGTATTTGGTACTTTTGCCGGTACTATATGGGCACATTGCTATAAGCATAAAAAATATA CTTTAATATGTTCAGATATAGGATCTACTGCGGAAAAATTCATAAGTGATATTAAAAATACATTATTAGAAAATGAATAT ATTAAAAAAGCTTTTGGAATTATTTTAAATGATAAGGATAAAAGATATAAATGTAACAGTACTCAACTGGAATTAACGAA TAAAACATTTATTGAAGCTATTTCAAGTGCCAGTCCCATGCGTGGTAGAAAGTATGATAATTGTAGGCCAGATTTAATTA TCCTTGATGACTACCAAAGTGAGGATGACGTAAGAACAGAACAGGCACGTGAGAATAAGTGGAAGCGGTATTCAGATGAT GTTAAATATGCTAGTCAAAAGGCAGTTATAAGAAATGGTAAAATAATTAAAAAAGGAACAACTTTTATTGCATTAGGAAC ACTCCAACATAAGGAGTGTTTTTATTCTAGGTTATTAAAAATGCCTACATGGAAATTTAAGAAAGAAAAAGGTGTATTAC TAGAAGATATAGACTTGTGCTTTACCACTGGATTGTGGGGTGAGTTCAAGTCTATTTTATTTAACTTTAAAAATGACAAT AGACTTGAAGATGCAAAAGAATTTTATTGGCAGCACCAGGAGAAAATGAGGTTTTCATTACTATGGGCTGAATTTTGGGA TTGCTTAGATATAGCCCTTAGTTATTATGAAAATCCTTCAAGCTTTAAGCAGGAAGTCCAGGGTGATGTTGATAGCATTG GGCAAAAGTGGTTTAAAGGTGTAAGAACTGAAACGAGAAAAGAAATAGAAACTCATAATTTTATTAAAAATATGCTTTTA ATAGACCCCGCTAGTGGTGGGGGTAAGAAAAACGACTATAGTGCTTTTTTAGTAGGTTCTATGGGAGATAATAATCTAAA ATATGCTCGTAAAGCTGAATTAACTAAAATAAATGCTAGAATTGAATTTGACAAGTATATTGACCATGCAATTAAACTAT TAAAGGACTATCAAGATATAACACATCTTTATATAGAAAAAAATACTTTCAATGGTGCCGATGCAAATGCCATTGAAAAT AAAATAAATGATGATCCAATGCTAAGAAATAGAAGCATTACTATAATTAACGAACATCAAAAGAAAAATAAAGATGATAA AATTTCTACTTTAATACCATACATTAATAAAGGCCAGATTATTTTTGCTGAGGAAGATAGTGAATTTACGGACCAGGTAT TGGATTTTAGAGGGCAGAAGTACAGCGTTCACGATGATGCTCCAGATATAACGGCTGAGTTTAGTCTAAGAATAGAAAAT ATTGAAGTAGTTGAAAATGTAGTATTATTGGATAGGAGAAAATTTGGTTTGTAG
Upstream 100 bases:
>100_bases TATAATAATGATGAAATTAATAAAAGGTTGAGAAGTATGTGTTTTTATAAATATAAAGATATGATTAAAAGATTTTAATC CAATGAAAGTAGGTGAGTAC
Downstream 100 bases:
>100_bases GAGGTGATTAAAATTATAGATATAGATATAGATTTACTTAAAAAAGCTTATGAAGAATATAAAAATAATAAAATTACTTA TGCAAAAATGTATGCCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MTEEQQNRYLLFKYLTEQFTIAGADDPEEKAKEMILNNSSNLFGYHGLAWQLGKLNMEFFCMYFLQNTFLPKENNAAAPI AKVHKEIWSDIENAIIGEGADQIGRILPRGTGKSVFGTFAGTIWAHCYKHKKYTLICSDIGSTAEKFISDIKNTLLENEY IKKAFGIILNDKDKRYKCNSTQLELTNKTFIEAISSASPMRGRKYDNCRPDLIILDDYQSEDDVRTEQARENKWKRYSDD VKYASQKAVIRNGKIIKKGTTFIALGTLQHKECFYSRLLKMPTWKFKKEKGVLLEDIDLCFTTGLWGEFKSILFNFKNDN RLEDAKEFYWQHQEKMRFSLLWAEFWDCLDIALSYYENPSSFKQEVQGDVDSIGQKWFKGVRTETRKEIETHNFIKNMLL IDPASGGGKKNDYSAFLVGSMGDNNLKYARKAELTKINARIEFDKYIDHAIKLLKDYQDITHLYIEKNTFNGADANAIEN KINDDPMLRNRSITIINEHQKKNKDDKISTLIPYINKGQIIFAEEDSEFTDQVLDFRGQKYSVHDDAPDITAEFSLRIEN IEVVENVVLLDRRKFGL
Sequences:
>Translated_577_residues MTEEQQNRYLLFKYLTEQFTIAGADDPEEKAKEMILNNSSNLFGYHGLAWQLGKLNMEFFCMYFLQNTFLPKENNAAAPI AKVHKEIWSDIENAIIGEGADQIGRILPRGTGKSVFGTFAGTIWAHCYKHKKYTLICSDIGSTAEKFISDIKNTLLENEY IKKAFGIILNDKDKRYKCNSTQLELTNKTFIEAISSASPMRGRKYDNCRPDLIILDDYQSEDDVRTEQARENKWKRYSDD VKYASQKAVIRNGKIIKKGTTFIALGTLQHKECFYSRLLKMPTWKFKKEKGVLLEDIDLCFTTGLWGEFKSILFNFKNDN RLEDAKEFYWQHQEKMRFSLLWAEFWDCLDIALSYYENPSSFKQEVQGDVDSIGQKWFKGVRTETRKEIETHNFIKNMLL IDPASGGGKKNDYSAFLVGSMGDNNLKYARKAELTKINARIEFDKYIDHAIKLLKDYQDITHLYIEKNTFNGADANAIEN KINDDPMLRNRSITIINEHQKKNKDDKISTLIPYINKGQIIFAEEDSEFTDQVLDFRGQKYSVHDDAPDITAEFSLRIEN IEVVENVVLLDRRKFGL >Mature_576_residues TEEQQNRYLLFKYLTEQFTIAGADDPEEKAKEMILNNSSNLFGYHGLAWQLGKLNMEFFCMYFLQNTFLPKENNAAAPIA KVHKEIWSDIENAIIGEGADQIGRILPRGTGKSVFGTFAGTIWAHCYKHKKYTLICSDIGSTAEKFISDIKNTLLENEYI KKAFGIILNDKDKRYKCNSTQLELTNKTFIEAISSASPMRGRKYDNCRPDLIILDDYQSEDDVRTEQARENKWKRYSDDV KYASQKAVIRNGKIIKKGTTFIALGTLQHKECFYSRLLKMPTWKFKKEKGVLLEDIDLCFTTGLWGEFKSILFNFKNDNR LEDAKEFYWQHQEKMRFSLLWAEFWDCLDIALSYYENPSSFKQEVQGDVDSIGQKWFKGVRTETRKEIETHNFIKNMLLI DPASGGGKKNDYSAFLVGSMGDNNLKYARKAELTKINARIEFDKYIDHAIKLLKDYQDITHLYIEKNTFNGADANAIENK INDDPMLRNRSITIINEHQKKNKDDKISTLIPYINKGQIIFAEEDSEFTDQVLDFRGQKYSVHDDAPDITAEFSLRIENI EVVENVVLLDRRKFGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66930; Mature: 66799
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEQQNRYLLFKYLTEQFTIAGADDPEEKAKEMILNNSSNLFGYHGLAWQLGKLNMEFF CCCCCCCCEEHEEEHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHH CMYFLQNTFLPKENNAAAPIAKVHKEIWSDIENAIIGEGADQIGRILPRGTGKSVFGTFA HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHH GTIWAHCYKHKKYTLICSDIGSTAEKFISDIKNTLLENEYIKKAFGIILNDKDKRYKCNS HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCEECCC TQLELTNKTFIEAISSASPMRGRKYDNCRPDLIILDDYQSEDDVRTEQARENKWKRYSDD CEEEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH VKYASQKAVIRNGKIIKKGTTFIALGTLQHKECFYSRLLKMPTWKFKKEKGVLLEDIDLC HHHHHHHHHHHCCEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH FTTGLWGEFKSILFNFKNDNRLEDAKEFYWQHQEKMRFSLLWAEFWDCLDIALSYYENPS HHCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SFKQEVQGDVDSIGQKWFKGVRTETRKEIETHNFIKNMLLIDPASGGGKKNDYSAFLVGS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEC MGDNNLKYARKAELTKINARIEFDKYIDHAIKLLKDYQDITHLYIEKNTFNGADANAIEN CCCCCCCHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHH KINDDPMLRNRSITIINEHQKKNKDDKISTLIPYINKGQIIFAEEDSEFTDQVLDFRGQK CCCCCCCCCCCCEEEEECHHHCCCCCHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCE YSVHDDAPDITAEFSLRIENIEVVENVVLLDRRKFGL EECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEEQQNRYLLFKYLTEQFTIAGADDPEEKAKEMILNNSSNLFGYHGLAWQLGKLNMEFF CCCCCCCEEHEEEHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHH CMYFLQNTFLPKENNAAAPIAKVHKEIWSDIENAIIGEGADQIGRILPRGTGKSVFGTFA HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHH GTIWAHCYKHKKYTLICSDIGSTAEKFISDIKNTLLENEYIKKAFGIILNDKDKRYKCNS HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCEECCC TQLELTNKTFIEAISSASPMRGRKYDNCRPDLIILDDYQSEDDVRTEQARENKWKRYSDD CEEEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH VKYASQKAVIRNGKIIKKGTTFIALGTLQHKECFYSRLLKMPTWKFKKEKGVLLEDIDLC HHHHHHHHHHHCCEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH FTTGLWGEFKSILFNFKNDNRLEDAKEFYWQHQEKMRFSLLWAEFWDCLDIALSYYENPS HHCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SFKQEVQGDVDSIGQKWFKGVRTETRKEIETHNFIKNMLLIDPASGGGKKNDYSAFLVGS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEC MGDNNLKYARKAELTKINARIEFDKYIDHAIKLLKDYQDITHLYIEKNTFNGADANAIEN CCCCCCCHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHH KINDDPMLRNRSITIINEHQKKNKDDKISTLIPYINKGQIIFAEEDSEFTDQVLDFRGQK CCCCCCCCCCCCEEEEECHHHCCCCCHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCE YSVHDDAPDITAEFSLRIENIEVVENVVLLDRRKFGL EECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA