| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757379
Identifier: 170757379
GI number: 170757379
Start: 2509024
End: 2509566
Strand: Reverse
Name: 170757379
Synonym: CLD_2248
Alternate gene names: NA
Gene position: 2509566-2509024 (Counterclockwise)
Preceding gene: 170757318
Following gene: 170754299
Centisome position: 63.4
GC content: 25.78
Gene sequence:
>543_bases ATGGAAAGAAATGAAATGATTGAAATTATAATTGAAAAGGCAAATATAACTCGGGAAGAGGCAATAGAAGTATTAGAGAA ATGCAATTGGGATATTATAGACTCTATTATATATTTAGAGAAAAACGGAAAAATAGGAAATAATGAAACTACTACAATAA TTGAAGTTAAAGAGGAAGAGCAACAGCAAGATAAAAAGAAAAATAGTAAAAAACATGAAGAAAAATATGGTGGAATTGGA GAAATGGTTGGTAGAATGTTTAAATTTATAGGTAAGCTTATAAGAAAAGGAAATGAGAACTATTTTGAGATAAAAAAAGA GAATGAAAAGCCAATGAGAATATCATTAACAATATCAATACTTTTATTAATATTTTTATCTGTACCAACTATAGTATTAT TGATAATCGGATTATTCTGTGGATATAAATACTCATTATCTGGTGCTTATAATAACTATGATGATGTAAATAATGTCTTT GAAAAAGCATCAGAATCAGCAGATAATGTTAAAAATGACTTTAAAAAAGGTTGTGCAAAATAA
Upstream 100 bases:
>100_bases ATTTTAATCTAATTTTAATCTTTCTTATATTTTAGATTAATCTTCTAAAAGTATTATATAACCATGATGAATGATTAATA AATACACGGAGGTAAATCAA
Downstream 100 bases:
>100_bases TATATAGTATAATAAAGAGATTTTGAAAATATTCAAAATCTCTTTATTTTTAAAGTTATATAAAGTCATAATTAAATGGT ATAATTTAATGGCTAAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: UBA/TS-N Domain-Containing Protein
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MERNEMIEIIIEKANITREEAIEVLEKCNWDIIDSIIYLEKNGKIGNNETTTIIEVKEEEQQQDKKKNSKKHEEKYGGIG EMVGRMFKFIGKLIRKGNENYFEIKKENEKPMRISLTISILLLIFLSVPTIVLLIIGLFCGYKYSLSGAYNNYDDVNNVF EKASESADNVKNDFKKGCAK
Sequences:
>Translated_180_residues MERNEMIEIIIEKANITREEAIEVLEKCNWDIIDSIIYLEKNGKIGNNETTTIIEVKEEEQQQDKKKNSKKHEEKYGGIG EMVGRMFKFIGKLIRKGNENYFEIKKENEKPMRISLTISILLLIFLSVPTIVLLIIGLFCGYKYSLSGAYNNYDDVNNVF EKASESADNVKNDFKKGCAK >Mature_180_residues MERNEMIEIIIEKANITREEAIEVLEKCNWDIIDSIIYLEKNGKIGNNETTTIIEVKEEEQQQDKKKNSKKHEEKYGGIG EMVGRMFKFIGKLIRKGNENYFEIKKENEKPMRISLTISILLLIFLSVPTIVLLIIGLFCGYKYSLSGAYNNYDDVNNVF EKASESADNVKNDFKKGCAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20756; Mature: 20756
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERNEMIEIIIEKANITREEAIEVLEKCNWDIIDSIIYLEKNGKIGNNETTTIIEVKEEE CCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCEEEEEEHHHH QQQDKKKNSKKHEEKYGGIGEMVGRMFKFIGKLIRKGNENYFEIKKENEKPMRISLTISI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHHHHH LLLIFLSVPTIVLLIIGLFCGYKYSLSGAYNNYDDVNNVFEKASESADNVKNDFKKGCAK HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERNEMIEIIIEKANITREEAIEVLEKCNWDIIDSIIYLEKNGKIGNNETTTIIEVKEEE CCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCEEEEEEHHHH QQQDKKKNSKKHEEKYGGIGEMVGRMFKFIGKLIRKGNENYFEIKKENEKPMRISLTISI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHHHHH LLLIFLSVPTIVLLIIGLFCGYKYSLSGAYNNYDDVNNVFEKASESADNVKNDFKKGCAK HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA