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The map label for this gene is yqaM [H]

Identifier: 170757318

GI number: 170757318

Start: 2509925

End: 2510734

Strand: Reverse

Name: yqaM [H]

Synonym: CLD_2247

Alternate gene names: 170757318

Gene position: 2510734-2509925 (Counterclockwise)

Preceding gene: 170755650

Following gene: 170757379

Centisome position: 63.43

GC content: 28.4

Gene sequence:

>810_bases
ATGACACTAAAAACGAGCATAAAAAGAATAATGAAGGAGATAAATAATCAAAGAGAAAATGGTCTGGGTATAAACCACCA
AAACCTAAATTGCAAAGGGATAGAAAATGTAAGGGACTCATATAAAGAAGTTTGTAATAAATGCGGTGGTAGTACATGGA
TAACTAATATAGATAAAGAAGGTAGAGTTTGTTGCAGAAGGTGTAGCTGCTATGAAATGCAAAGAGCTAAAGATATGTGG
AATTTAGCAGGAATAAATACAGAGCAATCTAAACATACCTTTTCAAACTATAAACCCTATAATGAAACAACTGAATTAGC
AAAGAATACAGCCATTCAATACTATAAAAACTTTGATAAAATCAAAAATACAAGGCGGAATAGTATAGCTTTTATAGGGC
AAGTGGGTAGCGGCAAAACTCATTTAAGTATAGCTTTAGCTGTAAATTTTTTAAGGAATAAGCAAGTTCCAGTTGTATAT
ATGCCTTATAGAAATACTATAACAAAAATAAAACAAAATATGATAGATGAAGAATATTATAGTAAGGTTTTATCAAAGTA
CCAAAAGGCAAAGATTCTTCTTATAGATGATTTATTTAAGGGTAAAATAAATGAATCAGATACAAATATAATGTTTGAAA
TAATTAATTATAGATATATGAATTATTTACCTATGATAGTTAGTTCTGAATTTACCATAGAAAGGCTCCTAGATTTTGAT
GAAGCTATAGGAAGTAGAATAATTGAAATGGCAAAGGATTATACTGTTGAAATAGTTGGGAAGGAAAATAATTATAGATT
AAAAATTTGA

Upstream 100 bases:

>100_bases
TTTGGTAAACATACTTATAAGTATATTAAGGGGATTTTAGAAAACTGGAAAATAAATGGGGGTGTTATGGAAAATAAGAA
GGTAAAAGGCGGCGATTTTG

Downstream 100 bases:

>100_bases
TGTTTAATAGGTATTGTAGGATTCCCAGTAGCGATTAGTGTATATCTTTTAGTTAGAGTTGAAAAAAAGCTTGATAATTT
AATTAAAGATTTTAATGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTLKTSIKRIMKEINNQRENGLGINHQNLNCKGIENVRDSYKEVCNKCGGSTWITNIDKEGRVCCRRCSCYEMQRAKDMW
NLAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDKIKNTRRNSIAFIGQVGSGKTHLSIALAVNFLRNKQVPVVY
MPYRNTITKIKQNMIDEEYYSKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYMNYLPMIVSSEFTIERLLDFD
EAIGSRIIEMAKDYTVEIVGKENNYRLKI

Sequences:

>Translated_269_residues
MTLKTSIKRIMKEINNQRENGLGINHQNLNCKGIENVRDSYKEVCNKCGGSTWITNIDKEGRVCCRRCSCYEMQRAKDMW
NLAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDKIKNTRRNSIAFIGQVGSGKTHLSIALAVNFLRNKQVPVVY
MPYRNTITKIKQNMIDEEYYSKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYMNYLPMIVSSEFTIERLLDFD
EAIGSRIIEMAKDYTVEIVGKENNYRLKI
>Mature_268_residues
TLKTSIKRIMKEINNQRENGLGINHQNLNCKGIENVRDSYKEVCNKCGGSTWITNIDKEGRVCCRRCSCYEMQRAKDMWN
LAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDKIKNTRRNSIAFIGQVGSGKTHLSIALAVNFLRNKQVPVVYM
PYRNTITKIKQNMIDEEYYSKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYMNYLPMIVSSEFTIERLLDFDE
AIGSRIIEMAKDYTVEIVGKENNYRLKI

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqxC and T.hyodysenteriae hemolysin tlyA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013317 [H]

Pfam domain/function: PF00308 Bac_DnaA [H]

EC number: NA

Molecular weight: Translated: 31428; Mature: 31296

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKTSIKRIMKEINNQRENGLGINHQNLNCKGIENVRDSYKEVCNKCGGSTWITNIDKE
CCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCC
GRVCCRRCSCYEMQRAKDMWNLAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IKNTRRNSIAFIGQVGSGKTHLSIALAVNFLRNKQVPVVYMPYRNTITKIKQNMIDEEYY
HHHCCCCCEEEEEECCCCCHHEEHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCHHHH
SKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYMNYLPMIVSSEFTIERLLDFD
HHHHHHHHHCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EAIGSRIIEMAKDYTVEIVGKENNYRLKI
HHHHHHHHHHHCCCEEEEEECCCCEEEEC
>Mature Secondary Structure 
TLKTSIKRIMKEINNQRENGLGINHQNLNCKGIENVRDSYKEVCNKCGGSTWITNIDKE
CCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCC
GRVCCRRCSCYEMQRAKDMWNLAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IKNTRRNSIAFIGQVGSGKTHLSIALAVNFLRNKQVPVVYMPYRNTITKIKQNMIDEEYY
HHHCCCCCEEEEEECCCCCHHEEHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCHHHH
SKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYMNYLPMIVSSEFTIERLLDFD
HHHHHHHHHCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EAIGSRIIEMAKDYTVEIVGKENNYRLKI
HHHHHHHHHHHCCCEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]