| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757332
Identifier: 170757332
GI number: 170757332
Start: 1189701
End: 1190915
Strand: Direct
Name: 170757332
Synonym: CLD_3494
Alternate gene names: NA
Gene position: 1189701-1190915 (Clockwise)
Preceding gene: 170755583
Following gene: 170754954
Centisome position: 30.06
GC content: 33.09
Gene sequence:
>1215_bases ATGTCAGATTTAAGTACTATAACAGAACAAGAAATTGAAATTAAGGAGGTGACAAAAAAGAATCTTAGACCCGTAATTGG GAAAGAAGGATTTATATGTTTAGCTTTGTTCTTAGGATTCTTCATTATTTTGGGTACTAAAATGGGAACAGTTAATATGT TTAATACTTTAATGAAAACTGGGTACCAATTACTTATGGAAACAGTTTTTTATATTATGGCTATAGCTGTTTTAGCTGGA GCTATATCAGGACTATTATCTGAATTTGGAGTTATTTCTTTAATAAATAAAGGCTTATCTCCATTAATGAAACCTTTATA TAAATTGCCAGGGGCTTCAGCGTTAGGAGTGGTTACAACTTATTTATCAGATAACCCTGCAATTATAAGTTTGGCAAAGG ATAAAGGATTTTTAAAGTATTTTAAGAAGTTTCAAGTGCCAGCATTAACTAATTTAGGAACTTCCTTTGGAATGGGATTA ATTTTAACTACATTTATGATTGCACAAAAATCTCCTACAGGTGAAAACTTTGTGCAGGCTGCTATAATAGGAGATATAGG TGCTGTTATTGGTAGTATTGTAAGTGTTAGATTAATGATTAGACATACTAGAAAATTCTATGGAGAACATGCGGATGATA TGGTTTATGAAAGTGATGATGATGGCTACGATTCCTTAAAATATAGAGAAGTTAGAGAAGGCGGAATAGGAGCAAGATTA CTTGAATCCTTATTAGAAGGTGGTAAAACAGGTGTTGAACTTGGACTAGCTATAATTCCTGGAGTAGTTATAATATGTAC TTTAGTATTAATGTTAACTAATGGGCCATCACCAAAAGGATACACAGGAGCAGCTTATGAGGGAATAGCATTTTTCCCTT GGGTAGGAGATAAATTAAGTTTTATTTTGAACCCATTATTTGGATTTAAGCATCCAGAGGCAATAGCCTTCCCAATAACT TCCTTAGGAGCTGTTGGTGCAGCTATGAGTTTAGTTCCTCAATTTTTATCAAAAAATTTAATTGGAGCTAATGAAATAGC AGTATTTACAGCTATGGGTATGTGCTGGAGTGGATACTTAAGTACTCATATAGCTATGATGGATAGCTTAAACTGCAGAA AATTAACAGGTAAAGCTATATTAAGTCATACTGTGGGAGGATTAGTAGCAGGAGTGTCAGCTCATATAATTTATATGTTA GTTACACTGATTTAG
Upstream 100 bases:
>100_bases GTTTTATTTGAAACTGATTAATATACTTAAAAATTTTATAAAAATACTTAAAATTTTATAAAAATTTAAACTTTATATAA AATCAAGGAGGAACGATTTT
Downstream 100 bases:
>100_bases TGTTATAATAGAAAATGTAAAAATAGAGATATGGAATTTTAAAATTCTATATCTCTATTTTTATTGAAAAGCAAGCGTGA ATCTATAAATAAGATCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSDLSTITEQEIEIKEVTKKNLRPVIGKEGFICLALFLGFFIILGTKMGTVNMFNTLMKTGYQLLMETVFYIMAIAVLAG AISGLLSEFGVISLINKGLSPLMKPLYKLPGASALGVVTTYLSDNPAIISLAKDKGFLKYFKKFQVPALTNLGTSFGMGL ILTTFMIAQKSPTGENFVQAAIIGDIGAVIGSIVSVRLMIRHTRKFYGEHADDMVYESDDDGYDSLKYREVREGGIGARL LESLLEGGKTGVELGLAIIPGVVIICTLVLMLTNGPSPKGYTGAAYEGIAFFPWVGDKLSFILNPLFGFKHPEAIAFPIT SLGAVGAAMSLVPQFLSKNLIGANEIAVFTAMGMCWSGYLSTHIAMMDSLNCRKLTGKAILSHTVGGLVAGVSAHIIYML VTLI
Sequences:
>Translated_404_residues MSDLSTITEQEIEIKEVTKKNLRPVIGKEGFICLALFLGFFIILGTKMGTVNMFNTLMKTGYQLLMETVFYIMAIAVLAG AISGLLSEFGVISLINKGLSPLMKPLYKLPGASALGVVTTYLSDNPAIISLAKDKGFLKYFKKFQVPALTNLGTSFGMGL ILTTFMIAQKSPTGENFVQAAIIGDIGAVIGSIVSVRLMIRHTRKFYGEHADDMVYESDDDGYDSLKYREVREGGIGARL LESLLEGGKTGVELGLAIIPGVVIICTLVLMLTNGPSPKGYTGAAYEGIAFFPWVGDKLSFILNPLFGFKHPEAIAFPIT SLGAVGAAMSLVPQFLSKNLIGANEIAVFTAMGMCWSGYLSTHIAMMDSLNCRKLTGKAILSHTVGGLVAGVSAHIIYML VTLI >Mature_403_residues SDLSTITEQEIEIKEVTKKNLRPVIGKEGFICLALFLGFFIILGTKMGTVNMFNTLMKTGYQLLMETVFYIMAIAVLAGA ISGLLSEFGVISLINKGLSPLMKPLYKLPGASALGVVTTYLSDNPAIISLAKDKGFLKYFKKFQVPALTNLGTSFGMGLI LTTFMIAQKSPTGENFVQAAIIGDIGAVIGSIVSVRLMIRHTRKFYGEHADDMVYESDDDGYDSLKYREVREGGIGARLL ESLLEGGKTGVELGLAIIPGVVIICTLVLMLTNGPSPKGYTGAAYEGIAFFPWVGDKLSFILNPLFGFKHPEAIAFPITS LGAVGAAMSLVPQFLSKNLIGANEIAVFTAMGMCWSGYLSTHIAMMDSLNCRKLTGKAILSHTVGGLVAGVSAHIIYMLV TLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43342; Mature: 43211
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLSTITEQEIEIKEVTKKNLRPVIGKEGFICLALFLGFFIILGTKMGTVNMFNTLMKT CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GYQLLMETVFYIMAIAVLAGAISGLLSEFGVISLINKGLSPLMKPLYKLPGASALGVVTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHH YLSDNPAIISLAKDKGFLKYFKKFQVPALTNLGTSFGMGLILTTFMIAQKSPTGENFVQA HCCCCCCEEEEECCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH AIIGDIGAVIGSIVSVRLMIRHTRKFYGEHADDMVYESDDDGYDSLKYREVREGGIGARL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH LESLLEGGKTGVELGLAIIPGVVIICTLVLMLTNGPSPKGYTGAAYEGIAFFPWVGDKLS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHH FILNPLFGFKHPEAIAFPITSLGAVGAAMSLVPQFLSKNLIGANEIAVFTAMGMCWSGYL HHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH STHIAMMDSLNCRKLTGKAILSHTVGGLVAGVSAHIIYMLVTLI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SDLSTITEQEIEIKEVTKKNLRPVIGKEGFICLALFLGFFIILGTKMGTVNMFNTLMKT CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GYQLLMETVFYIMAIAVLAGAISGLLSEFGVISLINKGLSPLMKPLYKLPGASALGVVTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHH YLSDNPAIISLAKDKGFLKYFKKFQVPALTNLGTSFGMGLILTTFMIAQKSPTGENFVQA HCCCCCCEEEEECCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH AIIGDIGAVIGSIVSVRLMIRHTRKFYGEHADDMVYESDDDGYDSLKYREVREGGIGARL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH LESLLEGGKTGVELGLAIIPGVVIICTLVLMLTNGPSPKGYTGAAYEGIAFFPWVGDKLS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHH FILNPLFGFKHPEAIAFPITSLGAVGAAMSLVPQFLSKNLIGANEIAVFTAMGMCWSGYL HHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH STHIAMMDSLNCRKLTGKAILSHTVGGLVAGVSAHIIYMLVTLI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA