| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yffB [C]
Identifier: 170754954
GI number: 170754954
Start: 1191289
End: 1191639
Strand: Direct
Name: yffB [C]
Synonym: CLD_3493
Alternate gene names: 170754954
Gene position: 1191289-1191639 (Clockwise)
Preceding gene: 170757332
Following gene: 170755989
Centisome position: 30.1
GC content: 24.79
Gene sequence:
>351_bases ATGAATATTCAAATATTTGGAGTAAAAAAATGTTTTGATACAAAAAAAGCTGAGAGATATTTTAAGGAAAGAAAAATAAA ATATCAATTTATAGATTTAAATATAAAAGGATTAAGTAAGGGAGAACTTCAAAGCATAAAATCTGCGGTAGGATTAAATG AGTTAATAAATAAAGATAGCAGAGAATATAAAAAAACTAATATAGGAAGTATTAGAACAGATAGTGTAAAAGAAGATTTG CTTTTAAATAATCCTAAATTATATAAAACTCCTATAGTACGTAATGGAAAAAAAGCAACAGTAGGATATGAACCAGAAAT TTGGAAAGAGTGGCAATCAACTGATTCTTAA
Upstream 100 bases:
>100_bases GAGATATATTAAAAATTGTTTATAATGATGTATGTATAAAATATAAAATATAAGTTTCATATCATATAATATAGTATAGA TTTGAAGGAGATAAGCAAAA
Downstream 100 bases:
>100_bases TGGGTGAAGTTCAAGAATTTTAATATCTGCTATTTTAATAGAATGTGGGAATATTAGCAAAGTTAGTAATGAGATAAACT TGAATTCTTTATATGTAATA
Product: ArsC family protein
Products: NA
Alternate protein names: Arsenate Reductase-Like Protein; ArsC Family Protein; Arsenate Reductase; Transcriptional Regulator; ArsC Family; Arsenate Reductase Related Protein; Arsenate Reductase And-Like Protein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNIQIFGVKKCFDTKKAERYFKERKIKYQFIDLNIKGLSKGELQSIKSAVGLNELINKDSREYKKTNIGSIRTDSVKEDL LLNNPKLYKTPIVRNGKKATVGYEPEIWKEWQSTDS
Sequences:
>Translated_116_residues MNIQIFGVKKCFDTKKAERYFKERKIKYQFIDLNIKGLSKGELQSIKSAVGLNELINKDSREYKKTNIGSIRTDSVKEDL LLNNPKLYKTPIVRNGKKATVGYEPEIWKEWQSTDS >Mature_116_residues MNIQIFGVKKCFDTKKAERYFKERKIKYQFIDLNIKGLSKGELQSIKSAVGLNELINKDSREYKKTNIGSIRTDSVKEDL LLNNPKLYKTPIVRNGKKATVGYEPEIWKEWQSTDS
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13490; Mature: 13490
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQIFGVKKCFDTKKAERYFKERKIKYQFIDLNIKGLSKGELQSIKSAVGLNELINKDS CCEEEEEHHHHHCHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHCCHHHHHCCCC REYKKTNIGSIRTDSVKEDLLLNNPKLYKTPIVRNGKKATVGYEPEIWKEWQSTDS HHHHHCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCEEECCCCHHHHHHHCCCCC >Mature Secondary Structure MNIQIFGVKKCFDTKKAERYFKERKIKYQFIDLNIKGLSKGELQSIKSAVGLNELINKDS CCEEEEEHHHHHCHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHCCHHHHHCCCC REYKKTNIGSIRTDSVKEDLLLNNPKLYKTPIVRNGKKATVGYEPEIWKEWQSTDS HHHHHCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCEEECCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA