The gene/protein map for NC_010516 is currently unavailable.
Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170757310

Identifier: 170757310

GI number: 170757310

Start: 734971

End: 736110

Strand: Reverse

Name: 170757310

Synonym: CLD_0144

Alternate gene names: NA

Gene position: 736110-734971 (Counterclockwise)

Preceding gene: 170756083

Following gene: 170754923

Centisome position: 18.6

GC content: 35.09

Gene sequence:

>1140_bases
GTGGAAATTGTTAAAGGAATGGGCCTATTGTTATTTACATTAGGATTATTTTCATTATTTAGCTTTAAAGCTCCTAAGGG
AAGTAAAGCTATGTCAGGGCTAGCAAATGCAGCAGTAGCTACCTTTTTAGTAGAAGCTATTCATAAATACATAAGTGGAA
ATTTTTTAAACTTTACTTTTCTAGGCAAAGTAGGAGAAGTATCAGGATCTATGGGTGGAGTAGCAGCAGCTATTTTAGTA
CCAATATCTATGGGGGTTAATCCCATTTATGCAGTGGTAGCAGGTGTAGCCATAGGTGGATATGGCATATTGCCTGGATT
TATAGCTGGATATATTATAGGTCTTATAGCACCTATATTTGATAAAAAGTTACCAGAAGGATTAAATACTATAGTAGGAG
CTCTTCTAATAGCTCCCTTAGCAAGATTTATAGCAATGGGAATAGATCCTGTTGTTAATGCTACATTAGTTAATATTGGA
CAAATGATATCCTTAGCTGCACAGCAATCACCATTAGTTATGGGATTCTTACTTGGTGGAATAATGAAGGTTGTATGTAC
CTCACCACTAAGCTCAATGGCAGTTACAGCTATGCTTGGACTACAAGGTTTAGCTATGGGTATCGCAGGTATAGCCTGTG
TTGGAGGCTCTTTTACAAATGGTATCATCTTTAAAAGACTTAAATTAGGTAATAAAAGTAATATAATAGCAGTAATGTTA
GAACCATTAACTCAAGCACCAATAGTAACTAAAAATCCTATTCCTATATATGGATCAAATATTTTAGGCGGAGGATTGGC
AGGACTTTCAGCGGCCTATTTTAATATAATAAATAATGCTCCAGGAACAGCATCCCCTATACCAGGACTACTCGCACCCT
TTGGATTTAATGATCCTAAAAAAGTTCTTATAGCTGTTACCTTTGCTATAATAGGAGGAACAATAGGTGGACTTGTTGGA
TCAGTTGTTTTTAAAGGTTTTGCTAAAAAAGACTGCAAGTTAGATGGGATTCCAGTTAATGAAATTAATGAAGTCAATGA
TGATATTAATAATATTGCTGGTGAAACTGCCACAGAAATTGCTACTGATACTGCCGATACTAATGTTGATATATTAAATG
CTAAAGGCAATACTTTTTAA

Upstream 100 bases:

>100_bases
TGAAACTTTCCGAAACTTTTTGAAAGCTAGGTTATATAGTCTAAATAATCAATTAATTCTGAAAATTATCAAAAAGTTTG
AATCAAGGGGGTTTCATATT

Downstream 100 bases:

>100_bases
ATATTTTTAATACAGTAAAATTAAATAATTGAACTAAAAAACAAAGAAGTAAATATCTTTTATATTTTCTTAGATTATTC
AAAAACCCTATGCATTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein; Regulatory Protein PfoR; Transcriptional Regulator; Perfringolysin O Regulatory Protein; Transcriptional Regulator PfoR

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKYISGNFLNFTFLGKVGEVSGSMGGVAAAILV
PISMGVNPIYAVVAGVAIGGYGILPGFIAGYIIGLIAPIFDKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIG
QMISLAAQQSPLVMGFLLGGIMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPKKVLIAVTFAIIGGTIGGLVG
SVVFKGFAKKDCKLDGIPVNEINEVNDDINNIAGETATEIATDTADTNVDILNAKGNTF

Sequences:

>Translated_379_residues
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKYISGNFLNFTFLGKVGEVSGSMGGVAAAILV
PISMGVNPIYAVVAGVAIGGYGILPGFIAGYIIGLIAPIFDKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIG
QMISLAAQQSPLVMGFLLGGIMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPKKVLIAVTFAIIGGTIGGLVG
SVVFKGFAKKDCKLDGIPVNEINEVNDDINNIAGETATEIATDTADTNVDILNAKGNTF
>Mature_379_residues
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKYISGNFLNFTFLGKVGEVSGSMGGVAAAILV
PISMGVNPIYAVVAGVAIGGYGILPGFIAGYIIGLIAPIFDKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIG
QMISLAAQQSPLVMGFLLGGIMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPKKVLIAVTFAIIGGTIGGLVG
SVVFKGFAKKDCKLDGIPVNEINEVNDDINNIAGETATEIATDTADTNVDILNAKGNTF

Specific function: Unknown

COG id: COG1299

COG function: function code G; Phosphotransferase system, fructose-specific IIC component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38658; Mature: 38658

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKYISGNFLNFTF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LGKVGEVSGSMGGVAAAILVPISMGVNPIYAVVAGVAIGGYGILPGFIAGYIIGLIAPIF
ECCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIGQMISLAAQQSPLVMGFLLGG
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEE
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPK
CCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHH
KVLIAVTFAIIGGTIGGLVGSVVFKGFAKKDCKLDGIPVNEINEVNDDINNIAGETATEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
ATDTADTNVDILNAKGNTF
HCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKYISGNFLNFTF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LGKVGEVSGSMGGVAAAILVPISMGVNPIYAVVAGVAIGGYGILPGFIAGYIIGLIAPIF
ECCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIGQMISLAAQQSPLVMGFLLGG
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEE
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPK
CCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHH
KVLIAVTFAIIGGTIGGLVGSVVFKGFAKKDCKLDGIPVNEINEVNDDINNIAGETATEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
ATDTADTNVDILNAKGNTF
HCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA