| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is glnL [H]
Identifier: 170756083
GI number: 170756083
Start: 736251
End: 737063
Strand: Reverse
Name: glnL [H]
Synonym: CLD_0143
Alternate gene names: 170756083
Gene position: 737063-736251 (Counterclockwise)
Preceding gene: 170755300
Following gene: 170757310
Centisome position: 18.62
GC content: 25.83
Gene sequence:
>813_bases TTGAGAGTATTAATAATAGATGATGACATAAATGTTCATAAGATTCTTAATAAAATAATAAATCATGAATGCCTGGGGGA AGTAATAAAGGATACTCCCCTAAATGGGGAAGATGGAGGATTTTTAATAGAGAAAGAAAAACCAGATATTGTTATTGTAG ATCTTTTAATGCCTGGAAAGGATGGTTTAACTTTAGTTAGAGAATATAAATCTAAATACCCTCATATTCAATATATAATG TTATCCCAAGTATCCTCTAAAGATATGATAGCTAAAGCCTATGAAAATGGAATTGAGTTTTATATAAGTAAACCTATAAA TGCAGTTGAGGTTAAATCTGTTTTAAAAAAGGTGATTAATAGTGGTATTATGAAAAAAAAATTAGGTAATATAGACTTCA TATTAAAAAAGGAAGATGAGGATAACTATACATCTAAGATTAAAAGTATAATGAATAAATTAGGCATATTAGGCGAATCA GGATGCGAAGATATAATAAAAAGTATAGAATTTATAATTGAAAATAATTCTAAAGATACCTATACTCTTAAAGAATTATT TAAAGAAATATCCGATAAACCCAAATCAATAGAACAAAGAATAAGAAGAACAGCCTTTGTAGCTTTAAATAATATTGCTA ATTTAGGACTAGAAGATTATATGAATGACATCTTTGTAGAGTTCTCAAATTCTATTTTTAGTTTTGAAGAAGTAAAAAAG GAAATGGATTATATAAGAGGAAAAAGCTCTGAAAAAGGATCCGTTAATGTTAAAAAATTCTTACAAGGAATAACTTATTA CATTAATAAATAA
Upstream 100 bases:
>100_bases AAACCGAGCTAAATGGAATTGTGAAACTAACATCTATAAAAGGAAAAGGTACTAAATTTATGATTTTTATACCCAAAGAT GTTTTAGAGGGGGAAAGAAT
Downstream 100 bases:
>100_bases GGTGTATTTGAAATTGTTATAATTATAACAAAATACTTTCTGAAACTTTCCGAAACTTTTTGAAAGCTAGGTTATATAGT CTAAATAATCAATTAATTCT
Product: response regulator
Products: NADP; 2 glutathione [C]
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MRVLIIDDDINVHKILNKIINHECLGEVIKDTPLNGEDGGFLIEKEKPDIVIVDLLMPGKDGLTLVREYKSKYPHIQYIM LSQVSSKDMIAKAYENGIEFYISKPINAVEVKSVLKKVINSGIMKKKLGNIDFILKKEDEDNYTSKIKSIMNKLGILGES GCEDIIKSIEFIIENNSKDTYTLKELFKEISDKPKSIEQRIRRTAFVALNNIANLGLEDYMNDIFVEFSNSIFSFEEVKK EMDYIRGKSSEKGSVNVKKFLQGITYYINK
Sequences:
>Translated_270_residues MRVLIIDDDINVHKILNKIINHECLGEVIKDTPLNGEDGGFLIEKEKPDIVIVDLLMPGKDGLTLVREYKSKYPHIQYIM LSQVSSKDMIAKAYENGIEFYISKPINAVEVKSVLKKVINSGIMKKKLGNIDFILKKEDEDNYTSKIKSIMNKLGILGES GCEDIIKSIEFIIENNSKDTYTLKELFKEISDKPKSIEQRIRRTAFVALNNIANLGLEDYMNDIFVEFSNSIFSFEEVKK EMDYIRGKSSEKGSVNVKKFLQGITYYINK >Mature_270_residues MRVLIIDDDINVHKILNKIINHECLGEVIKDTPLNGEDGGFLIEKEKPDIVIVDLLMPGKDGLTLVREYKSKYPHIQYIM LSQVSSKDMIAKAYENGIEFYISKPINAVEVKSVLKKVINSGIMKKKLGNIDFILKKEDEDNYTSKIKSIMNKLGILGES GCEDIIKSIEFIIENNSKDTYTLKELFKEISDKPKSIEQRIRRTAFVALNNIANLGLEDYMNDIFVEFSNSIFSFEEVKK EMDYIRGKSSEKGSVNVKKFLQGITYYINK
Specific function: Member of the two-component regulatory system glnL/glnK that positively regulates the expression of the glsA-glnT operon in response to glutamine. GlnL binds the promoter region of glsA- glnT in vitro [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790299, Length=216, Percent_Identity=24.0740740740741, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR013972 [H]
Pfam domain/function: PF00072 Response_reg; PF08664 YcbB [H]
EC number: NA
Molecular weight: Translated: 30894; Mature: 30894
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLIIDDDINVHKILNKIINHECLGEVIKDTPLNGEDGGFLIEKEKPDIVIVDLLMPGK CEEEEEECCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEECCC DGLTLVREYKSKYPHIQYIMLSQVSSKDMIAKAYENGIEFYISKPINAVEVKSVLKKVIN CCHHHHHHHHHCCCCEEEHHHHHCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH SGIMKKKLGNIDFILKKEDEDNYTSKIKSIMNKLGILGESGCEDIIKSIEFIIENNSKDT CCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCH YTLKELFKEISDKPKSIEQRIRRTAFVALNNIANLGLEDYMNDIFVEFSNSIFSFEEVKK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH EMDYIRGKSSEKGSVNVKKFLQGITYYINK HHHHHCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRVLIIDDDINVHKILNKIINHECLGEVIKDTPLNGEDGGFLIEKEKPDIVIVDLLMPGK CEEEEEECCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEECCC DGLTLVREYKSKYPHIQYIMLSQVSSKDMIAKAYENGIEFYISKPINAVEVKSVLKKVIN CCHHHHHHHHHCCCCEEEHHHHHCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH SGIMKKKLGNIDFILKKEDEDNYTSKIKSIMNKLGILGESGCEDIIKSIEFIIENNSKDT CCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCH YTLKELFKEISDKPKSIEQRIRRTAFVALNNIANLGLEDYMNDIFVEFSNSIFSFEEVKK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH EMDYIRGKSSEKGSVNVKKFLQGITYYINK HHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH2; oxidized glutathione [C]
Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]
General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8011666; 7704254; 9384377 [H]