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The map label for this gene is ydfS [H]

Identifier: 170757283

GI number: 170757283

Start: 1405462

End: 1406190

Strand: Direct

Name: ydfS [H]

Synonym: CLD_3294

Alternate gene names: 170757283

Gene position: 1405462-1406190 (Clockwise)

Preceding gene: 170755614

Following gene: 170754238

Centisome position: 35.51

GC content: 30.59

Gene sequence:

>729_bases
TTGAATGAAGCTTTAGTTGTGTTAGTTAGAGCTATAATAGGTTTTTTTACTCTTTTAATATTTGCAAGAATGTTAGGAAA
GCAACAAATAAGTCAGCTTACTTTTTTTGATTATGTGCTTGGCATAACTATAGGGTCTACGGCTTCTACACTAAGTACAG
ATCTAGAAAGTACAGCTTGGTCTCATTGGGTTGGGCTTTTAACTTGGTGCGGTATAGGATTCTTACTGCAATGGATAACA
TTAAAGTGGAGATATGCAGCCAAATATATAGAGGGAGAGCCGACTATTGTAATAATGGATGGTAAAATAATGGAGGATAC
CTTAAGAAAAATGAAATATACAGTGGCAGATGTTTTAGAACAACTTAGAGGAAAAGACATTTTTGATTTGTCAAAGGTAG
AGTTTGCAATATTAGAATCTGATGGACAATTATCCGTACTAAAGAAACCAGAAGAAGAGCCATTAACAGCTAAAGATTTA
AATATATTTAAGAGTAAAACAGGCATAAGTAGAGAGCTTATATATGATGGAAAAATAGTAGAAGATAATCTAAGAGAAAT
AAATAGAGATAAAGAATGGCTAAAAGCTGAGTTGAAAAAAAGAAATATCAAAGATTCATCAGATGTTTTTTTAGCTACTA
TAAATGAAAATAATCAAATTTATATAGATACATATAAAGATCATCTAAAAAGAATAATAGACATAGGAGACTATAAAGGA
CCTTACTAA

Upstream 100 bases:

>100_bases
ATATGTTTTTAATACAATAGGATTAACTAAAATGTATAAATAAAAGTAAAGGGTAGAATACTATTATAGAAAAATTTTCT
ATAGGTAGGGAGTGTTGTAA

Downstream 100 bases:

>100_bases
TTGCTTTATCATATCTTATTATTTTTTGTGTTTAAATTCATTCCATTCAAGTATTGTATTTATCTAAATATTAATTTTAA
TTAAGTAATAAAAGTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNEALVVLVRAIIGFFTLLIFARMLGKQQISQLTFFDYVLGITIGSTASTLSTDLESTAWSHWVGLLTWCGIGFLLQWIT
LKWRYAAKYIEGEPTIVIMDGKIMEDTLRKMKYTVADVLEQLRGKDIFDLSKVEFAILESDGQLSVLKKPEEEPLTAKDL
NIFKSKTGISRELIYDGKIVEDNLREINRDKEWLKAELKKRNIKDSSDVFLATINENNQIYIDTYKDHLKRIIDIGDYKG
PY

Sequences:

>Translated_242_residues
MNEALVVLVRAIIGFFTLLIFARMLGKQQISQLTFFDYVLGITIGSTASTLSTDLESTAWSHWVGLLTWCGIGFLLQWIT
LKWRYAAKYIEGEPTIVIMDGKIMEDTLRKMKYTVADVLEQLRGKDIFDLSKVEFAILESDGQLSVLKKPEEEPLTAKDL
NIFKSKTGISRELIYDGKIVEDNLREINRDKEWLKAELKKRNIKDSSDVFLATINENNQIYIDTYKDHLKRIIDIGDYKG
PY
>Mature_242_residues
MNEALVVLVRAIIGFFTLLIFARMLGKQQISQLTFFDYVLGITIGSTASTLSTDLESTAWSHWVGLLTWCGIGFLLQWIT
LKWRYAAKYIEGEPTIVIMDGKIMEDTLRKMKYTVADVLEQLRGKDIFDLSKVEFAILESDGQLSVLKKPEEEPLTAKDL
NIFKSKTGISRELIYDGKIVEDNLREINRDKEWLKAELKKRNIKDSSDVFLATINENNQIYIDTYKDHLKRIIDIGDYKG
PY

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=140, Percent_Identity=25, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 27828; Mature: 27828

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEALVVLVRAIIGFFTLLIFARMLGKQQISQLTFFDYVLGITIGSTASTLSTDLESTAW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SHWVGLLTWCGIGFLLQWITLKWRYAAKYIEGEPTIVIMDGKIMEDTLRKMKYTVADVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHH
QLRGKDIFDLSKVEFAILESDGQLSVLKKPEEEPLTAKDLNIFKSKTGISRELIYDGKIV
HHCCCCCCCHHHHEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHEECCEEE
EDNLREINRDKEWLKAELKKRNIKDSSDVFLATINENNQIYIDTYKDHLKRIIDIGDYKG
HHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCC
PY
CC
>Mature Secondary Structure
MNEALVVLVRAIIGFFTLLIFARMLGKQQISQLTFFDYVLGITIGSTASTLSTDLESTAW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SHWVGLLTWCGIGFLLQWITLKWRYAAKYIEGEPTIVIMDGKIMEDTLRKMKYTVADVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHH
QLRGKDIFDLSKVEFAILESDGQLSVLKKPEEEPLTAKDLNIFKSKTGISRELIYDGKIV
HHCCCCCCCHHHHEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHEECCEEE
EDNLREINRDKEWLKAELKKRNIKDSSDVFLATINENNQIYIDTYKDHLKRIIDIGDYKG
HHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCC
PY
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]