Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170754238

Identifier: 170754238

GI number: 170754238

Start: 1406353

End: 1406718

Strand: Direct

Name: 170754238

Synonym: CLD_3293

Alternate gene names: NA

Gene position: 1406353-1406718 (Clockwise)

Preceding gene: 170757283

Following gene: 170755468

Centisome position: 35.53

GC content: 27.05

Gene sequence:

>366_bases
ATGAGAAGATTTTTAGTAAGAATAATTCCAATAGTAACCTTAAGTCTTTTTCTTGCCGTTATGTTAAGTGCAAGTTATAT
GAAAAAACCTAGGAATCAAGAGGAAAATGTAGATAAATTTATAAGCAGTACAATAGAATATGTAAAGAATGAAGAGTGGG
GTAATGCAGAAAAGGAAATAGAAAAATTAGATTTAGCATGGAATAAGATTTTAAAAAGAGTTCAATTTAGCTCGGAATTA
GACCAAATAAATTATTTAAGTGAAAGTATAAATAAAGCTAAAGGTGGGATAATTGCAGAAGACAAAGGTATAAGTTTATC
TAACTTAATAAGCTTTTATGAGGAATGGAAAATTATAGGTAAATAA

Upstream 100 bases:

>100_bases
TCTAAATATTAATTTTAATTAAGTAATAAAAGTATTAAAAAATATAAATTAAGATGTTATTAAAGTTATATTTACGAAAT
AAATTTTAAAGGGTGATTAT

Downstream 100 bases:

>100_bases
AAATAGAATATATTTAAAATTATAAATTTTTATTAAGTGAAGTAAAAAACAAATTATTTATGTAATAGCATATAGGTGAA
TAAAAAATAATACTAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEIEKLDLAWNKILKRVQFSSEL
DQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIGK

Sequences:

>Translated_121_residues
MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEIEKLDLAWNKILKRVQFSSEL
DQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIGK
>Mature_121_residues
MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEIEKLDLAWNKILKRVQFSSEL
DQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14045; Mature: 14045

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00268 CECROPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
EKLDLAWNKILKRVQFSSELDQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCC
K
C
>Mature Secondary Structure
MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
EKLDLAWNKILKRVQFSSELDQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA