Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is glxK

Identifier: 170757239

GI number: 170757239

Start: 2432789

End: 2433931

Strand: Reverse

Name: glxK

Synonym: CLD_2341

Alternate gene names: 170757239

Gene position: 2433931-2432789 (Counterclockwise)

Preceding gene: 170757160

Following gene: 170757596

Centisome position: 61.49

GC content: 34.03

Gene sequence:

>1143_bases
ATGAAATTTGTTTTAGCTCCAGACTCTTTTAAAGAAAGTATGACAGCAAAGGAAGTAGCATATGCTATGGAAAGGGGAAT
AAAAAAAGTTTTAAAAAATGCTGAATGTATGAAGGTTCCTATGGCAGATGGTGGAGAGGGAACAGTTCAATCTCTAGTGG
ATGCAACAAATGGACAAATAGTTCATGCTGAAGTAACGGGCCCGGATGGAAAAAATAAGGTGGATGCTGTATTTGGAATA
CTTGGAGATCATAAAACTGCAGTTATAGAAATGTCTAGTGCCAGCGGAATTCATCTTATAGAATCTGAGAAAAGAAATCC
CCTATACACTACAACATATGGAACAGGAGAACTTATAAAGGCAGCCTTAGATAAAAATATCTCTACAATACTTATAGGTA
TTGGGGGTAGTGCTACAAATGATGGTGGGGCAGGTATGGTTGCAGCTCTTGGAGCAAAACTTTTAGATAAAGATAAAAAT
GAGGTTCCTTTTGGAGGAGGTCATTTAAATAAACTACAGGAAATTGATTTAAAAAAATTAGATGAAAGATTGAAAAATGT
AAATATAAGGGTTGCTTGTGATGTGGACAATCCACTTTTAGGACAAAAGGGAGCTTCTTATGTTTTTGGACCTCAAAAGG
GAGCTACTCCCGAAATAGCAAAAAAACTAGATAAGAATTTAGCTTCTTTTGCAAATATTATAGAAAATAAGTTAGGTAAA
GATATAAAAGAAATACCAGGAGCAGGAGCAGCAGGTGGATTAGGATTTGGACTTATGGCATTTTTAAATGCTAAACTTGA
AAAAGGAATTGATCTTGTAATTGAGTATACAAAATTAAGAGAAAAAGTAAAAAGTGCAGATTTTGTGTTTACAGGAGAGG
GTAGTATAGATTTTCAAACAATCTTTGGAAAAACTCCTTTCGGAGTAGCCAAGGTTGCAAAAGAATTTAATATACCAGTT
ATAGCCTTTGCAGCACATGTTGGAGATGATGTAGATATTTTATATGAAAATGGAATTGACTCTATTGTAGGAATTTTAAG
GGGAGTCACCGATTTGAAAAGTGCTCTTAAAGAAGGAAAAATAAATGTAGAAAAGGCTAGTGAAAATATAACTAGGATTT
TAACTGTTGCAAGAAGATATTAA

Upstream 100 bases:

>100_bases
TTATATATAATTGAATGTAAGCAATTTGATTTAAATAATTTAATTATGTTATGATTTTATAAAAATAAATTAAGCCAGCT
TAAAGAAGGGATTGAAAAAA

Downstream 100 bases:

>100_bases
AATAATATGTTATTGTTTAATAAAGTATTTAAATCTAAAACTTCTTTTGATAAGTTTTGTATTTCATTATAATTTTTTTC
TTTAACATCCTTCTTCTTTA

Product: glycerate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKFVLAPDSFKESMTAKEVAYAMERGIKKVLKNAECMKVPMADGGEGTVQSLVDATNGQIVHAEVTGPDGKNKVDAVFGI
LGDHKTAVIEMSSASGIHLIESEKRNPLYTTTYGTGELIKAALDKNISTILIGIGGSATNDGGAGMVAALGAKLLDKDKN
EVPFGGGHLNKLQEIDLKKLDERLKNVNIRVACDVDNPLLGQKGASYVFGPQKGATPEIAKKLDKNLASFANIIENKLGK
DIKEIPGAGAAGGLGFGLMAFLNAKLEKGIDLVIEYTKLREKVKSADFVFTGEGSIDFQTIFGKTPFGVAKVAKEFNIPV
IAFAAHVGDDVDILYENGIDSIVGILRGVTDLKSALKEGKINVEKASENITRILTVARRY

Sequences:

>Translated_380_residues
MKFVLAPDSFKESMTAKEVAYAMERGIKKVLKNAECMKVPMADGGEGTVQSLVDATNGQIVHAEVTGPDGKNKVDAVFGI
LGDHKTAVIEMSSASGIHLIESEKRNPLYTTTYGTGELIKAALDKNISTILIGIGGSATNDGGAGMVAALGAKLLDKDKN
EVPFGGGHLNKLQEIDLKKLDERLKNVNIRVACDVDNPLLGQKGASYVFGPQKGATPEIAKKLDKNLASFANIIENKLGK
DIKEIPGAGAAGGLGFGLMAFLNAKLEKGIDLVIEYTKLREKVKSADFVFTGEGSIDFQTIFGKTPFGVAKVAKEFNIPV
IAFAAHVGDDVDILYENGIDSIVGILRGVTDLKSALKEGKINVEKASENITRILTVARRY
>Mature_380_residues
MKFVLAPDSFKESMTAKEVAYAMERGIKKVLKNAECMKVPMADGGEGTVQSLVDATNGQIVHAEVTGPDGKNKVDAVFGI
LGDHKTAVIEMSSASGIHLIESEKRNPLYTTTYGTGELIKAALDKNISTILIGIGGSATNDGGAGMVAALGAKLLDKDKN
EVPFGGGHLNKLQEIDLKKLDERLKNVNIRVACDVDNPLLGQKGASYVFGPQKGATPEIAKKLDKNLASFANIIENKLGK
DIKEIPGAGAAGGLGFGLMAFLNAKLEKGIDLVIEYTKLREKVKSADFVFTGEGSIDFQTIFGKTPFGVAKVAKEFNIPV
IAFAAHVGDDVDILYENGIDSIVGILRGVTDLKSALKEGKINVEKASENITRILTVARRY

Specific function: Unknown

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI145693185, Length=379, Percent_Identity=52.5065963060686, Blast_Score=370, Evalue=1e-104,
Organism=Escherichia coli, GI1786724, Length=378, Percent_Identity=46.8253968253968, Blast_Score=338, Evalue=3e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 40423; Mature: 40423

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVLAPDSFKESMTAKEVAYAMERGIKKVLKNAECMKVPMADGGEGTVQSLVDATNGQI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCCEE
VHAEVTGPDGKNKVDAVFGILGDHKTAVIEMSSASGIHLIESEKRNPLYTTTYGTGELIK
EEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCHHHHH
AALDKNISTILIGIGGSATNDGGAGMVAALGAKLLDKDKNEVPFGGGHLNKLQEIDLKKL
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
DERLKNVNIRVACDVDNPLLGQKGASYVFGPQKGATPEIAKKLDKNLASFANIIENKLGK
HHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DIKEIPGAGAAGGLGFGLMAFLNAKLEKGIDLVIEYTKLREKVKSADFVFTGEGSIDFQT
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEE
IFGKTPFGVAKVAKEFNIPVIAFAAHVGDDVDILYENGIDSIVGILRGVTDLKSALKEGK
ECCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
INVEKASENITRILTVARRY
CEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFVLAPDSFKESMTAKEVAYAMERGIKKVLKNAECMKVPMADGGEGTVQSLVDATNGQI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCCEE
VHAEVTGPDGKNKVDAVFGILGDHKTAVIEMSSASGIHLIESEKRNPLYTTTYGTGELIK
EEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCHHHHH
AALDKNISTILIGIGGSATNDGGAGMVAALGAKLLDKDKNEVPFGGGHLNKLQEIDLKKL
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
DERLKNVNIRVACDVDNPLLGQKGASYVFGPQKGATPEIAKKLDKNLASFANIIENKLGK
HHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DIKEIPGAGAAGGLGFGLMAFLNAKLEKGIDLVIEYTKLREKVKSADFVFTGEGSIDFQT
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEE
IFGKTPFGVAKVAKEFNIPVIAFAAHVGDDVDILYENGIDSIVGILRGVTDLKSALKEGK
ECCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
INVEKASENITRILTVARRY
CEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]