Click here to switch to the map view.

The map label for this gene is natB [H]

Identifier: 170757160

GI number: 170757160

Start: 2435373

End: 2436551

Strand: Reverse

Name: natB [H]

Synonym: CLD_2338

Alternate gene names: 170757160

Gene position: 2436551-2435373 (Counterclockwise)

Preceding gene: 170754916

Following gene: 170757239

Centisome position: 61.56

GC content: 28.58

Gene sequence:

>1179_bases
ATGAAAAATATAGTAGCAGTAGTGTTAAAAAAAGAACTTTTAGATTTATTTAGAGACAAAAAAACACTAATATTAAGTAT
ATTAATTCCAATAATTCTTTTACCTATAATGTCTTTTGCTATTGGTAAAATGGCAAAATCAGATAGTGATAAGGTTCAAA
ATAACCTTAAAATAGCCATAGTAGATCAAGGAAATAGTAGTTTTTCTAAATTTATAAAATCTCATAAAAATGTTAAAGTA
ATGGACGCTAAAAATATTGATAAAGACATAAAAGATGGAGATGTATATCTACAGATTAAAATCCCAAAGGGATTTGATGA
AAACATATCAAAGGATTCTAATGAAAAAATAGAATTAAAATATGATAACTCAAGTAATGATGCAATGACAGCTGTATCAA
TGATTAAAAATTACATAGATGAATATTCAAAACAAATAGTTGCAGAGCGACTTGAAAAGAAGGATATAGATCAATCCATA
TTAACCCCAATTAATATTGTAGATAATGTGGTTGGAGATAAAGATGATGGTTTTGGGAAAATAATGGCTTCAATGATGAT
TCCTTTACTTTTAATGCTTTACAGTGCAACAAGTACAATTGGAGCAGCAGTAGATCTAGGGGCAGGAGAGAAAGAAAGAG
GAACACTTGAACCACTTCTTACAACAAAAGCAGGAAGAACATCTTTACTTGTAGGAAAATTTCTTGCAATAACAGTAATG
GGAATATTAATGTCCTGTGCTTATTTGATTGGAATATTAATAACAATGAATCAACCAAATGGAATGTTTGGTGATGCAGG
ACTAAATTTAGGACCAGCTACTTTAATTCTTATTATGATTTTACCTATTTTATATACAATGGTATTTGGAGCACTTCAAC
TGGCCATTAGTATCTATGCAAAATCATTTAAAGAAGCTCAAACATACCTAAGTCCTATAACTATTATAGCCATGGTATTA
ATTTATATGGTTATGATGAAAGACCCTAAAAATATAGGAATGCTTTATTTTAATATACCACTTACAAATGGAGTTTGTCT
TATGAAAGAGTTTTTAGCTGGAATTTATAACTATACTCACATAGCAATAACCTTTGGCTGGATAATTGTATATATAGTTG
CATCTATTTCATTTGCAAGATATATGTTCTCAAAAGAAGAAGTTATATTCAGAACATAA

Upstream 100 bases:

>100_bases
ATAGTAGAAGAAGGAAAGCTCAGAGAACTTGAAGAAAAATATAATAACAGCATAGAAGAAATATTTATAAATTTAATAGC
AAAGTAAAGAGGGTGATTAT

Downstream 100 bases:

>100_bases
TATAAGGTGTATAAATAAAACTAATTAAAAAAAAGTATTTATATAAATTTTGATTTTGAAGAGAATGTCTCAAAATAAAA
ATAGCCTTAATTTTAATATA

Product: putative sodium extrusion protein NatB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAIVDQGNSSFSKFIKSHKNVKV
MDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELKYDNSSNDAMTAVSMIKNYIDEYSKQIVAERLEKKDIDQSI
LTPINIVDNVVGDKDDGFGKIMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLILIMILPILYTMVFGALQLAISIYAKSFKEAQTYLSPITIIAMVL
IYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNYTHIAITFGWIIVYIVASISFARYMFSKEEVIFRT

Sequences:

>Translated_392_residues
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAIVDQGNSSFSKFIKSHKNVKV
MDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELKYDNSSNDAMTAVSMIKNYIDEYSKQIVAERLEKKDIDQSI
LTPINIVDNVVGDKDDGFGKIMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLILIMILPILYTMVFGALQLAISIYAKSFKEAQTYLSPITIIAMVL
IYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNYTHIAITFGWIIVYIVASISFARYMFSKEEVIFRT
>Mature_392_residues
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAIVDQGNSSFSKFIKSHKNVKV
MDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELKYDNSSNDAMTAVSMIKNYIDEYSKQIVAERLEKKDIDQSI
LTPINIVDNVVGDKDDGFGKIMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLILIMILPILYTMVFGALQLAISIYAKSFKEAQTYLSPITIIAMVL
IYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNYTHIAITFGWIIVYIVASISFARYMFSKEEVIFRT

Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43490; Mature: 43490

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAI
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEE
VDQGNSSFSKFIKSHKNVKVMDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELK
EECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEE
YDNSSNDAMTAVSMIKNYIDEYSKQIVAERLEKKDIDQSILTPINIVDNVVGDKDDGFGK
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH
IMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLILIMILPILYTMVFGALQLAISIYA
HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFKEAQTYLSPITIIAMVLIYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNYTH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
IAITFGWIIVYIVASISFARYMFSKEEVIFRT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAI
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEE
VDQGNSSFSKFIKSHKNVKVMDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELK
EECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEE
YDNSSNDAMTAVSMIKNYIDEYSKQIVAERLEKKDIDQSILTPINIVDNVVGDKDDGFGK
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH
IMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLILIMILPILYTMVFGALQLAISIYA
HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFKEAQTYLSPITIIAMVLIYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNYTH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
IAITFGWIIVYIVASISFARYMFSKEEVIFRT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9106203; 9384377 [H]