| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757220
Identifier: 170757220
GI number: 170757220
Start: 2346180
End: 2346509
Strand: Reverse
Name: 170757220
Synonym: CLD_2418
Alternate gene names: NA
Gene position: 2346509-2346180 (Counterclockwise)
Preceding gene: 170755957
Following gene: 170757569
Centisome position: 59.28
GC content: 22.73
Gene sequence:
>330_bases TTGGATCCTAAATTAGTTGATTATATTAATAAGTTGGAAAAAGAAAATTTGGAATTAAAGAAACAATTAGAAGAAACACA AAAAGACATAATAAGTTGGAATAACTTAAAAACATTAATAAACAATAGTCTTTCAGAACTAGATGAAACAAGAGGACCAT ATAGTTATTTAATAAGACATGTTGAAAGTGGTATCAATATGATTATTAGGGCAACATTTAATTTAAAATTTATCAAGGAT ATTGATGAAACAAATTATAAGCAATCAAAAGAATTTACTGAAATGGTCTTAGATTATGTGAAAAAGAATTTTATTAAAGG TAAATATTAA
Upstream 100 bases:
>100_bases TCTAAGTTATTTAATTGCACAATGGAAGATATTTTTTTACCATATGGTACAACTAATAGTGATAAACTAGAAGATTAAAA CTGATTGGAAGGTGATTTAA
Downstream 100 bases:
>100_bases GGAAGGAGGACAAGCAATGAATGAAGTAACAACGTTTGAAGGTCAAGAAGTAAAAGTAAAAACAGATAAAGGAGTAACGC TTATTAATTTAGCACATACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MDPKLVDYINKLEKENLELKKQLEETQKDIISWNNLKTLINNSLSELDETRGPYSYLIRHVESGINMIIRATFNLKFIKD IDETNYKQSKEFTEMVLDYVKKNFIKGKY
Sequences:
>Translated_109_residues MDPKLVDYINKLEKENLELKKQLEETQKDIISWNNLKTLINNSLSELDETRGPYSYLIRHVESGINMIIRATFNLKFIKD IDETNYKQSKEFTEMVLDYVKKNFIKGKY >Mature_109_residues MDPKLVDYINKLEKENLELKKQLEETQKDIISWNNLKTLINNSLSELDETRGPYSYLIRHVESGINMIIRATFNLKFIKD IDETNYKQSKEFTEMVLDYVKKNFIKGKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13010; Mature: 13010
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPKLVDYINKLEKENLELKKQLEETQKDIISWNNLKTLINNSLSELDETRGPYSYLIRH CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VESGINMIIRATFNLKFIKDIDETNYKQSKEFTEMVLDYVKKNFIKGKY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDPKLVDYINKLEKENLELKKQLEETQKDIISWNNLKTLINNSLSELDETRGPYSYLIRH CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VESGINMIIRATFNLKFIKDIDETNYKQSKEFTEMVLDYVKKNFIKGKY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA