| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755957
Identifier: 170755957
GI number: 170755957
Start: 2346532
End: 2346756
Strand: Reverse
Name: 170755957
Synonym: CLD_2417
Alternate gene names: NA
Gene position: 2346756-2346532 (Counterclockwise)
Preceding gene: 170754444
Following gene: 170757220
Centisome position: 59.29
GC content: 26.22
Gene sequence:
>225_bases ATGTCAAATCATATTACTGAATTGAGAAAGAATGCTGGATTTAATACAGTTAAAAATGTTACATCTAAATTAGAAATTAG TGATAGTATGATGTATCAGATTGAGGGAGGTTATAAAAAGCCAAGTCCTAATTTAGCAATTAAAATGTCTAAGTTATTTA ATTGCACAATGGAAGATATTTTTTTACCATATGGTACAACTAATAGTGATAAACTAGAAGATTAA
Upstream 100 bases:
>100_bases TTATTTTCTCACTATTAGTTATAATTACACTTGATTATTATCACTGATGGTTGTATTATGTAGTCATGGACAGGCAGTAC ATGAAAGGAAGTGATTAAAA
Downstream 100 bases:
>100_bases AACTGATTGGAAGGTGATTTAATTGGATCCTAAATTAGTTGATTATATTAATAAGTTGGAAAAAGAAAATTTGGAATTAA AGAAACAATTAGAAGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSNHITELRKNAGFNTVKNVTSKLEISDSMMYQIEGGYKKPSPNLAIKMSKLFNCTMEDIFLPYGTTNSDKLED
Sequences:
>Translated_74_residues MSNHITELRKNAGFNTVKNVTSKLEISDSMMYQIEGGYKKPSPNLAIKMSKLFNCTMEDIFLPYGTTNSDKLED >Mature_73_residues SNHITELRKNAGFNTVKNVTSKLEISDSMMYQIEGGYKKPSPNLAIKMSKLFNCTMEDIFLPYGTTNSDKLED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8381; Mature: 8250
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHITELRKNAGFNTVKNVTSKLEISDSMMYQIEGGYKKPSPNLAIKMSKLFNCTMEDI CCCHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEHHHHCCCHHHE FLPYGTTNSDKLED EECCCCCCCCCCCC >Mature Secondary Structure SNHITELRKNAGFNTVKNVTSKLEISDSMMYQIEGGYKKPSPNLAIKMSKLFNCTMEDI CCHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEHHHHCCCHHHE FLPYGTTNSDKLED EECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA