| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757199
Identifier: 170757199
GI number: 170757199
Start: 2319439
End: 2319933
Strand: Reverse
Name: 170757199
Synonym: CLD_2458
Alternate gene names: NA
Gene position: 2319933-2319439 (Counterclockwise)
Preceding gene: 170755699
Following gene: 170754231
Centisome position: 58.61
GC content: 30.91
Gene sequence:
>495_bases ATGGGAATCTTTAGTAGGAAGAATAAAAATGGTGATAGAAGTGTTAATTTATCTTTCGTAGATGGAATAGAAGGATATGG AAAGGGATTAGCTGTTGAGCTTAGCATAAATACAGAAAAAGAATGTTTAACTATAAAATCCAGAGTGGTTAAAAAGCCAG AAGTTAATTTGAAGTTTGAACAAATAACAGGTATAAATGTTATTAGTGAAAAAGATATAATAGAGAAAAGTAAAAGTACA GTCGGAAGAGCGGCAGTTGGTGGAGTTTTATTAGGCCCCTTAGGTGCTATTGTAGGTGGTATGAGTGGCATAGGTAACAA ACAAAAAAGTAAAACTCATTATTATATGGTTATAAACTATATGTCTAAAGATAGAGAAGTAAAAGTTTTATCTTTTGAAA TAGTTGGGGCAAGTTTACACTGGTCATCATTTGTGGAAGAATTAAGAAGTAAAATAAATGCTGAAACCTTAGAGAATGAG GAAGTATATTTATAA
Upstream 100 bases:
>100_bases GAAGAAATAAATAATATCTTGCTAAATGGTGGAGATGTTAGCAAAGTATTGTAAAATGTTCTTCCTGTAATGTATAATCA TGTTAATGGGAGGGATCACA
Downstream 100 bases:
>100_bases CACTTGGGAATCCAGGTGTTATTTTTTTATGATTGAAAGAGGTGATTAATATTGAAGAAATAAGATGTCCTAATTGTAAT CAGTTATTATTAAAAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MGIFSRKNKNGDRSVNLSFVDGIEGYGKGLAVELSINTEKECLTIKSRVVKKPEVNLKFEQITGINVISEKDIIEKSKST VGRAAVGGVLLGPLGAIVGGMSGIGNKQKSKTHYYMVINYMSKDREVKVLSFEIVGASLHWSSFVEELRSKINAETLENE EVYL
Sequences:
>Translated_164_residues MGIFSRKNKNGDRSVNLSFVDGIEGYGKGLAVELSINTEKECLTIKSRVVKKPEVNLKFEQITGINVISEKDIIEKSKST VGRAAVGGVLLGPLGAIVGGMSGIGNKQKSKTHYYMVINYMSKDREVKVLSFEIVGASLHWSSFVEELRSKINAETLENE EVYL >Mature_163_residues GIFSRKNKNGDRSVNLSFVDGIEGYGKGLAVELSINTEKECLTIKSRVVKKPEVNLKFEQITGINVISEKDIIEKSKSTV GRAAVGGVLLGPLGAIVGGMSGIGNKQKSKTHYYMVINYMSKDREVKVLSFEIVGASLHWSSFVEELRSKINAETLENEE VYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18029; Mature: 17898
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFSRKNKNGDRSVNLSFVDGIEGYGKGLAVELSINTEKECLTIKSRVVKKPEVNLKFE CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEE QITGINVISEKDIIEKSKSTVGRAAVGGVLLGPLGAIVGGMSGIGNKQKSKTHYYMVINY EECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE MSKDREVKVLSFEIVGASLHWSSFVEELRSKINAETLENEEVYL ECCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCC >Mature Secondary Structure GIFSRKNKNGDRSVNLSFVDGIEGYGKGLAVELSINTEKECLTIKSRVVKKPEVNLKFE CCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEE QITGINVISEKDIIEKSKSTVGRAAVGGVLLGPLGAIVGGMSGIGNKQKSKTHYYMVINY EECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE MSKDREVKVLSFEIVGASLHWSSFVEELRSKINAETLENEEVYL ECCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA