| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755699
Identifier: 170755699
GI number: 170755699
Start: 2319980
End: 2320573
Strand: Reverse
Name: 170755699
Synonym: CLD_2457
Alternate gene names: NA
Gene position: 2320573-2319980 (Counterclockwise)
Preceding gene: 170755587
Following gene: 170757199
Centisome position: 58.63
GC content: 27.61
Gene sequence:
>594_bases ATGAATGTGCTAATAGATTTGGTACCAACTACAATTGAAATAGAGGGTGAGGAGTATGAGATTAACTCTAACTTTAGAGT GTCCATACTCTTTGAACTTTTAATGCAAGATAACTCTATTAGTGAAGAAAATAAGATTATACAAGCATTACAACTTTATT ATCCTGTTATACCACCTAATATTAATTTAGCTGTAGATAAAATGCTATGGTTCTATAGATGTGGAAAAGATATACTACCA TCTAAAGGTACTGGAAAGGGTAAAAGCACACAAATTTATTCTTTTAATTTTGATGATGATTATATTTATAGTGCTTTTTT AGACCAGTACAGAATAGACTTACAAGACATAGAATATCTACATTGGTGGAAGTTTAAAGCTATGTTTAAGGCTCTTAAGG AAGATAATGAGATAGTTAAAATAATGGGATATAGAAGTATGGATTTATCTAAAATAAAAGATAAAGAAGAAAAAAAATAT TATAGAAAAATGCAAGAGTTATATAAGATTCCAATTGCTAAAGATGAAAAAGATAAGTTAGAAGAAATAAATAATATCTT GCTAAATGGTGGAGATGTTAGCAAAGTATTGTAA
Upstream 100 bases:
>100_bases TTGATGAGCTTATAACTCAAACAAATGCATCTCGTGCAGAAGTTGAAAAAATAGCTAACAAATATTCTCCTAATAGGGCA GCTAGAAGAAAGAAAAAATA
Downstream 100 bases:
>100_bases AATGTTCTTCCTGTAATGTATAATCATGTTAATGGGAGGGATCACAATGGGAATCTTTAGTAGGAAGAATAAAAATGGTG ATAGAAGTGTTAATTTATCT
Product: putative protein gp15
Products: NA
Alternate protein names: Protein Gp
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MNVLIDLVPTTIEIEGEEYEINSNFRVSILFELLMQDNSISEENKIIQALQLYYPVIPPNINLAVDKMLWFYRCGKDILP SKGTGKGKSTQIYSFNFDDDYIYSAFLDQYRIDLQDIEYLHWWKFKAMFKALKEDNEIVKIMGYRSMDLSKIKDKEEKKY YRKMQELYKIPIAKDEKDKLEEINNILLNGGDVSKVL
Sequences:
>Translated_197_residues MNVLIDLVPTTIEIEGEEYEINSNFRVSILFELLMQDNSISEENKIIQALQLYYPVIPPNINLAVDKMLWFYRCGKDILP SKGTGKGKSTQIYSFNFDDDYIYSAFLDQYRIDLQDIEYLHWWKFKAMFKALKEDNEIVKIMGYRSMDLSKIKDKEEKKY YRKMQELYKIPIAKDEKDKLEEINNILLNGGDVSKVL >Mature_197_residues MNVLIDLVPTTIEIEGEEYEINSNFRVSILFELLMQDNSISEENKIIQALQLYYPVIPPNINLAVDKMLWFYRCGKDILP SKGTGKGKSTQIYSFNFDDDYIYSAFLDQYRIDLQDIEYLHWWKFKAMFKALKEDNEIVKIMGYRSMDLSKIKDKEEKKY YRKMQELYKIPIAKDEKDKLEEINNILLNGGDVSKVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23311; Mature: 23311
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLIDLVPTTIEIEGEEYEINSNFRVSILFELLMQDNSISEENKIIQALQLYYPVIPPN CCEEEEECCCEEEECCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC INLAVDKMLWFYRCGKDILPSKGTGKGKSTQIYSFNFDDDYIYSAFLDQYRIDLQDIEYL CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHH HWWKFKAMFKALKEDNEIVKIMGYRSMDLSKIKDKEEKKYYRKMQELYKIPIAKDEKDKL HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHH EEINNILLNGGDVSKVL HHHHHHEECCCCHHHCC >Mature Secondary Structure MNVLIDLVPTTIEIEGEEYEINSNFRVSILFELLMQDNSISEENKIIQALQLYYPVIPPN CCEEEEECCCEEEECCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC INLAVDKMLWFYRCGKDILPSKGTGKGKSTQIYSFNFDDDYIYSAFLDQYRIDLQDIEYL CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHH HWWKFKAMFKALKEDNEIVKIMGYRSMDLSKIKDKEEKKYYRKMQELYKIPIAKDEKDKL HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHH EEINNILLNGGDVSKVL HHHHHHEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA