| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757181
Identifier: 170757181
GI number: 170757181
Start: 648282
End: 648656
Strand: Direct
Name: 170757181
Synonym: CLD_0222
Alternate gene names: NA
Gene position: 648282-648656 (Clockwise)
Preceding gene: 170756358
Following gene: 170756313
Centisome position: 16.38
GC content: 24.53
Gene sequence:
>375_bases ATGCCAGTTTGGTTAAAATTTGCATTACAAATACTTTTCTTTTCTATTATTGTTATAATTGGTTATACAGCTCTTAAAGT TTATGTTTTAGACAAAATCAATATTAATAAATGGGTGGTATTTGCATTATCTATATTTATATTAATTTTTCCTGCATTAA TAAAATTCAATATTAATGGCACTATATGGCAGTATGTCCAATCTGCTATAGTAATAATTCTTACATTATGGTTTTTAGAT TTAATGGGTATAGGAGCAGGGAGTAGACCTAAAAGGAAAAAGAATGATATAGTTATTAGACCTAAAGCTAAGCCAAATCG AGCAAAAAATATTAAAAAGGAAAATAATAAAAAAGAAAATAATAAAAAAAAGTAA
Upstream 100 bases:
>100_bases TATAAACATTTTTAAGTAAAAGTATTTATATTAATATCTTGATATATTATATGAAATATATAATAATGGTATAGTATCAA ATTTTTAAGGAGGGAATGTT
Downstream 100 bases:
>100_bases AGATTGTTTAGTTTCATATAAAAACACACTAAAATCCAGTTTTAGAGGTTAGTGTGTTTTTTAGTTTTTATAAACATATT TAAGGGTGAATTGTATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MPVWLKFALQILFFSIIVIIGYTALKVYVLDKININKWVVFALSIFILIFPALIKFNINGTIWQYVQSAIVIILTLWFLD LMGIGAGSRPKRKKNDIVIRPKAKPNRAKNIKKENNKKENNKKK
Sequences:
>Translated_124_residues MPVWLKFALQILFFSIIVIIGYTALKVYVLDKININKWVVFALSIFILIFPALIKFNINGTIWQYVQSAIVIILTLWFLD LMGIGAGSRPKRKKNDIVIRPKAKPNRAKNIKKENNKKENNKKK >Mature_123_residues PVWLKFALQILFFSIIVIIGYTALKVYVLDKININKWVVFALSIFILIFPALIKFNINGTIWQYVQSAIVIILTLWFLDL MGIGAGSRPKRKKNDIVIRPKAKPNRAKNIKKENNKKENNKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14372; Mature: 14240
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVWLKFALQILFFSIIVIIGYTALKVYVLDKININKWVVFALSIFILIFPALIKFNING CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TIWQYVQSAIVIILTLWFLDLMGIGAGSRPKRKKNDIVIRPKAKPNRAKNIKKENNKKEN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHCCHHHCCCCCC NKKK CCCC >Mature Secondary Structure PVWLKFALQILFFSIIVIIGYTALKVYVLDKININKWVVFALSIFILIFPALIKFNING CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TIWQYVQSAIVIILTLWFLDLMGIGAGSRPKRKKNDIVIRPKAKPNRAKNIKKENNKKEN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHCCHHHCCCCCC NKKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA