Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757180

Identifier: 170757180

GI number: 170757180

Start: 2736748

End: 2737236

Strand: Reverse

Name: 170757180

Synonym: CLD_1999

Alternate gene names: NA

Gene position: 2737236-2736748 (Counterclockwise)

Preceding gene: 170754548

Following gene: 170756779

Centisome position: 69.15

GC content: 20.04

Gene sequence:

>489_bases
ATGTATAGAAGTAAATATTTTAAATATATGAATGTATATTATAGTAATGGTAAAAAAGTAGGTTTTATAAAGGATATATT
AGTAGATTTTAATGAAGAAAGAATTATAGGTTTTTGTGTGAGCTCTTATAAAATATTAAATAAAAATAATATAGTACTTG
TAGAGGATATAATATCAATAAATAAAAATATGGTGGTAAAAAAACTAGAAAGGGGAAAGTATTTAAGTTTTAATGATATA
AAGCATTTAGAGGTTATAGATATAGAGGGCGTTTTAATGGGAGTTATTGAAGATATAATAATAAATGAAGGTAATTTTAG
AATAGTTGCTATTATAATATCTATGGGATTTTTAAATAATTTTATAAAAGGGAAAAAAATAATAAGTCCTAATGAAATAA
TATTAGGAGAAAGAAATCTACTTTATTTTAATTATAGAAGTAGAAATTTAGATTTTAAAATTATGGTTAAAAACAAAATG
AATACATAG

Upstream 100 bases:

>100_bases
TTTTATTTTTTTGATAAAACTAAAGGTAAGATGTTGGTAATTGGACTATAAGTTTTAGGAGTTTTTCAATTTTAAAATAT
TAATATAAAGTGGGGTAAAG

Downstream 100 bases:

>100_bases
GAGTAAGAGATCATGAGAAAATATTACAAAAATTTGTACTGTAAACTATTATTTTTTATATTAGTATTCCTAGTATTTTT
TATTATACTTATAAAAAATA

Product: PRC-barrel domain-containing protein

Products: NA

Alternate protein names: PRC-Barrel Domain Protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISINKNMVVKKLERGKYLSFNDI
KHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNNFIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKM
NT

Sequences:

>Translated_162_residues
MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISINKNMVVKKLERGKYLSFNDI
KHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNNFIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKM
NT
>Mature_162_residues
MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISINKNMVVKKLERGKYLSFNDI
KHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNNFIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKM
NT

Specific function: Unknown

COG id: COG3881

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18995; Mature: 18995

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISI
CCCHHHEEEEEEEECCCCEEEHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEHHHHC
NKNMVVKKLERGKYLSFNDIKHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNN
CCCCEEHHHHCCCEECCCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHH
FIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKMNT
HHCCCEEECCCEEEEECCCEEEEEECCCCCEEEEEEECCCCC
>Mature Secondary Structure
MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISI
CCCHHHEEEEEEEECCCCEEEHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEHHHHC
NKNMVVKKLERGKYLSFNDIKHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNN
CCCCEEHHHHCCCEECCCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHH
FIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKMNT
HHCCCEEECCCEEEEECCCEEEEEECCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA