| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757158
Identifier: 170757158
GI number: 170757158
Start: 1451878
End: 1452093
Strand: Direct
Name: 170757158
Synonym: CLD_3246
Alternate gene names: NA
Gene position: 1451878-1452093 (Clockwise)
Preceding gene: 170755866
Following gene: 170757807
Centisome position: 36.68
GC content: 19.44
Gene sequence:
>216_bases TTGAATATAAGCAAAAGTGGGCTTACTTTTTTACAATTTGCACTTTCTTTTATAATATATAAGTTATTAATGAATTCTTT TAACTTTAATTATAATTTATTTAGTGATAAGTTTAATATATTAAAGTTTTTTATGGATTTTGGATGCTGGGTTATAGTAT ATTTAATAGTATGTTTTATTTTTTCAAAGTTAGTTACAATAAAAAAAGGTAAGTAG
Upstream 100 bases:
>100_bases ATTATTATAAAATTATTTTGTTTTTATTTTGGACATCAGTTAATTTATGGTTTATTATAAATATATATATTTATATTTGT TAATGATTGGGGGAATATAA
Downstream 100 bases:
>100_bases AATTTTATTTTAAATTTTTATAAAAAAGGAGATAAGTATGAAAAACACTATGGAAAACTGTAATTTTTGCAAGATAATAA ACAAGGAAAAAAAGGCTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MNISKSGLTFLQFALSFIIYKLLMNSFNFNYNLFSDKFNILKFFMDFGCWVIVYLIVCFIFSKLVTIKKGK
Sequences:
>Translated_71_residues MNISKSGLTFLQFALSFIIYKLLMNSFNFNYNLFSDKFNILKFFMDFGCWVIVYLIVCFIFSKLVTIKKGK >Mature_71_residues MNISKSGLTFLQFALSFIIYKLLMNSFNFNYNLFSDKFNILKFFMDFGCWVIVYLIVCFIFSKLVTIKKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8415; Mature: 8415
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISKSGLTFLQFALSFIIYKLLMNSFNFNYNLFSDKFNILKFFMDFGCWVIVYLIVCFI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKLVTIKKGK HHHHHHHCCCC >Mature Secondary Structure MNISKSGLTFLQFALSFIIYKLLMNSFNFNYNLFSDKFNILKFFMDFGCWVIVYLIVCFI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKLVTIKKGK HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA