| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755866
Identifier: 170755866
GI number: 170755866
Start: 1451149
End: 1451424
Strand: Direct
Name: 170755866
Synonym: CLD_3247
Alternate gene names: NA
Gene position: 1451149-1451424 (Clockwise)
Preceding gene: 170755035
Following gene: 170757158
Centisome position: 36.66
GC content: 26.81
Gene sequence:
>276_bases ATGTATGGAAAGGAAAACTTAAGTAAAGTTTATTTAGGAGTATTCTCAGCTAGTGACAGTAATGAACACAATATGTTTAA TGTTACATATATGTTAGGTATAATTAAGAATGTTTGTCCAGAGTTTAAAGATCCAGATAAATGGATAAACTCTTCAATTA AAGAATTGGCTGAAAATCCAGAAAAAACTGTAACTAAGGATTTAGGAAGCAAAAAAATAACAATAGAACTTAAAAAAGAT ATGGGATTACTTTCAATAAATATAGAGCCAAAATAA
Upstream 100 bases:
>100_bases AAGAAGAAATAGGATTTAAGTTTTCAAATTCGCCATTAGAAGATGGCACACCTAGACAACTTGGGCAAAGTGCAGAAGGT AAAGGAGCTGCTATACTTGA
Downstream 100 bases:
>100_bases TATTAAACATAAATAAAAACTCTAGAGGGTTAACCTTTAGAGTTTTTTATTTGACGTCAAAAATACGTCAAAAATGTTTT TCTAATTATTTTAATTTGTT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MYGKENLSKVYLGVFSASDSNEHNMFNVTYMLGIIKNVCPEFKDPDKWINSSIKELAENPEKTVTKDLGSKKITIELKKD MGLLSINIEPK
Sequences:
>Translated_91_residues MYGKENLSKVYLGVFSASDSNEHNMFNVTYMLGIIKNVCPEFKDPDKWINSSIKELAENPEKTVTKDLGSKKITIELKKD MGLLSINIEPK >Mature_91_residues MYGKENLSKVYLGVFSASDSNEHNMFNVTYMLGIIKNVCPEFKDPDKWINSSIKELAENPEKTVTKDLGSKKITIELKKD MGLLSINIEPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10311; Mature: 10311
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGKENLSKVYLGVFSASDSNEHNMFNVTYMLGIIKNVCPEFKDPDKWINSSIKELAENP CCCCCCHHEEEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC EKTVTKDLGSKKITIELKKDMGLLSINIEPK HHHHHHHCCCCEEEEEECCCCCEEEEEECCC >Mature Secondary Structure MYGKENLSKVYLGVFSASDSNEHNMFNVTYMLGIIKNVCPEFKDPDKWINSSIKELAENP CCCCCCHHEEEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC EKTVTKDLGSKKITIELKKDMGLLSINIEPK HHHHHHHCCCCEEEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA