| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757127
Identifier: 170757127
GI number: 170757127
Start: 2697197
End: 2697670
Strand: Reverse
Name: 170757127
Synonym: CLD_2055
Alternate gene names: NA
Gene position: 2697670-2697197 (Counterclockwise)
Preceding gene: 170754941
Following gene: 170756462
Centisome position: 68.15
GC content: 32.91
Gene sequence:
>474_bases ATGGCACAACGTAGTCTAAGACAATGCAAGCAACGTTGGTGTAAGAACCTAACAAGAGATATAACAGGTTACTGCGAGGA ACATATACACATATACGAAGAAAGAAGGGCACAAGGAAATAAATACTATGATAAGCATATAAGACATAGCAAGGATAAGA AGTATACTAAGTTTTATCATAGTGATGAATGGGAAGATTTAAGAAAAGATGTTTTAACAACTTATAATGGTGTAGATATA TATTCATATTATATAGAAAACAAAGCAGTAACTGCAAATACGGCGCACCACATTATAGAGTTAAAAGAGGATTGGGATAA AAGATTAGATAAAGATAATATTTTTCCTTTAACAGATGCTAATCACAAGAAGATACACTCACTATATAGGAAGGATAAAA AAGGAACTCAAGAACTACTTAGAGAGCTACTAGAAAGATTCAGAAAGCAATTTGGTATATCCCCCCTCCCTTAG
Upstream 100 bases:
>100_bases TTAATGAGGTTAAGAATATAACAATAAATAATAATGTAGATATAAAAGATATAATGAAGAGGTGTGTGGAAGCAGTAATG AGCATGGAGCCTTTACAGTA
Downstream 100 bases:
>100_bases AGAATTTAGAGCTCTTCTAAAAGACCGAGGGGGTAGATTCCCTCGCAAAAAATTCCCTAAATGAAATTTTTGAAAAAGGA GACTATTGCTATGGAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: HNH Endonuclease; Gp50 Protein; Electron Transporter
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYHSDEWEDLRKDVLTTYNGVDI YSYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDANHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP
Sequences:
>Translated_157_residues MAQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYHSDEWEDLRKDVLTTYNGVDI YSYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDANHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP >Mature_156_residues AQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYHSDEWEDLRKDVLTTYNGVDIY SYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDANHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19163; Mature: 19032
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHC SDEWEDLRKDVLTTYNGVDIYSYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDA CCCHHHHHHHHHHHCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCC NHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHC SDEWEDLRKDVLTTYNGVDIYSYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDA CCCHHHHHHHHHHHCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCC NHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA