Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754941

Identifier: 170754941

GI number: 170754941

Start: 2697670

End: 2698092

Strand: Reverse

Name: 170754941

Synonym: CLD_2054

Alternate gene names: NA

Gene position: 2698092-2697670 (Counterclockwise)

Preceding gene: 170756015

Following gene: 170757127

Centisome position: 68.16

GC content: 27.19

Gene sequence:

>423_bases
ATGAATAAAGTATTATATGAATGTAGAAAATGTGGAAAGACATTTATTAATAATGGAAATAGAGACGGATTAAATTGCGA
TAAGTGTAAAGGATCATTGATACCTTCAGGTTATGTAGATGAATTACAAAATGGAATAAGAAAGATGAAAGACAAGATAG
AGAATGCAGAAACATACATAGTAAATAAAAAGAACAAAGCGAGGGAAGTAACAATAAAGATAAATTTAGATACGATAGAG
TTTGAGAATAAATTAAATAGAATAGAAAAGAAGTTAGAGAGAATAAAGTCTTTAGAAGATACATTAAAGTTTAGCAAAGA
CTTTAATGAGGTTAAGAATATAACAATAAATAATAATGTAGATATAAAAGATATAATGAAGAGGTGTGTGGAAGCAGTAA
TGAGCATGGAGCCTTTACAGTAA

Upstream 100 bases:

>100_bases
TGGAGATAGGTAATGATATGAATAAGTTAAAGAATAAAATGTTAGGCACTCAATAGAGTGTCTATTTATTTGTGCAAAAA
AATATAAGGAGGAAAATAAA

Downstream 100 bases:

>100_bases
TGGCACAACGTAGTCTAAGACAATGCAAGCAACGTTGGTGTAAGAACCTAACAAGAGATATAACAGGTTACTGCGAGGAA
CATATACACATATACGAAGA

Product: putative non-transporter ABC protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNKVLYECRKCGKTFINNGNRDGLNCDKCKGSLIPSGYVDELQNGIRKMKDKIENAETYIVNKKNKAREVTIKINLDTIE
FENKLNRIEKKLERIKSLEDTLKFSKDFNEVKNITINNNVDIKDIMKRCVEAVMSMEPLQ

Sequences:

>Translated_140_residues
MNKVLYECRKCGKTFINNGNRDGLNCDKCKGSLIPSGYVDELQNGIRKMKDKIENAETYIVNKKNKAREVTIKINLDTIE
FENKLNRIEKKLERIKSLEDTLKFSKDFNEVKNITINNNVDIKDIMKRCVEAVMSMEPLQ
>Mature_140_residues
MNKVLYECRKCGKTFINNGNRDGLNCDKCKGSLIPSGYVDELQNGIRKMKDKIENAETYIVNKKNKAREVTIKINLDTIE
FENKLNRIEKKLERIKSLEDTLKFSKDFNEVKNITINNNVDIKDIMKRCVEAVMSMEPLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16264; Mature: 16264

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVLYECRKCGKTFINNGNRDGLNCDKCKGSLIPSGYVDELQNGIRKMKDKIENAETYI
CCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
VNKKNKAREVTIKINLDTIEFENKLNRIEKKLERIKSLEDTLKFSKDFNEVKNITINNNV
EECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DIKDIMKRCVEAVMSMEPLQ
CHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNKVLYECRKCGKTFINNGNRDGLNCDKCKGSLIPSGYVDELQNGIRKMKDKIENAETYI
CCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
VNKKNKAREVTIKINLDTIEFENKLNRIEKKLERIKSLEDTLKFSKDFNEVKNITINNNV
EECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DIKDIMKRCVEAVMSMEPLQ
CHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA