| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yfbW [C]
Identifier: 170757118
GI number: 170757118
Start: 2515990
End: 2516346
Strand: Reverse
Name: yfbW [C]
Synonym: CLD_2241
Alternate gene names: 170757118
Gene position: 2516346-2515990 (Counterclockwise)
Preceding gene: 170756055
Following gene: 170755740
Centisome position: 63.57
GC content: 28.57
Gene sequence:
>357_bases ATGATATATTTAATATTGACATCAGTTTTTCTAGGAGCATTAGGACAAATATTGGTGAAATATGGAGCAGTTAATTTAAC ATTAAATTTTTCACCAGCACACCTCTTACCTAGTATAGTATCTATATTAAAAAATATGCCAGTAATGGCAGGTATAATAT CCTATGGAGTTAGCTTTTTACTTTGGATAAAAGTATTGAGTAAAGTAGAATTAAGCTATGCATATCCAATGGTAAGTTTA GGCTATGTATTAGTAATGATATTCTCTTACTTTTTCTTTAAAGAAAATATAACCCCTATAAGAATATTAGGAGTTGCATT TATAATGATAGGAGTAATACTAGTAGCTAGAAGCTAG
Upstream 100 bases:
>100_bases AAGGGCAAGGCAGATATGCTTTCCCATTAATATTTATAATTATATACTTTTGGGTTTATTTTATTAAACATGGAATACTT TTATTTAAGGAGTTAAAAAG
Downstream 100 bases:
>100_bases ATTAATATATTATAAAGTTAATCATAATTATAAAGAAATTCTTATACTGGAAGCTATTTTAAGTAATTATTAAAATTAAA CTTATGAGCAATAAATTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Small Multidrug Resistance Protein; Multidrug Resistance Protein SMR Family; QuateRNAry Ammonium Compound-Resistance Protein; Transporter DME Family
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHLLPSIVSILKNMPVMAGIISYGVSFLLWIKVLSKVELSYAYPMVSL GYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS
Sequences:
>Translated_118_residues MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHLLPSIVSILKNMPVMAGIISYGVSFLLWIKVLSKVELSYAYPMVSL GYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS >Mature_118_residues MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHLLPSIVSILKNMPVMAGIISYGVSFLLWIKVLSKVELSYAYPMVSL GYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13067; Mature: 13067
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHLLPSIVSILKNMPVMAGIISYGVSFL CHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LWIKVLSKVELSYAYPMVSLGYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHLLPSIVSILKNMPVMAGIISYGVSFL CHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LWIKVLSKVELSYAYPMVSLGYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA