Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170756055

Identifier: 170756055

GI number: 170756055

Start: 2516343

End: 2517626

Strand: Reverse

Name: 170756055

Synonym: CLD_2240

Alternate gene names: NA

Gene position: 2517626-2516343 (Counterclockwise)

Preceding gene: 170756851

Following gene: 170757118

Centisome position: 63.6

GC content: 24.84

Gene sequence:

>1284_bases
ATGGAATTTAATTATTTAAGTGGTTATGAAAATAAAGACAGTAATTATAGTAAAACAAATTATTATAAAATAATAATAGG
TTTATCTATGCTTCTTTGTATTCTTTGGGTGATATTTGTAGATACAAAGCCTTTTTCAGATTTTGAATATTATTATAATT
TAGCAGTTAGTATAGCTAATGGAGGTGAGTGGGGAGATACTTATACCTCCGTAGGTTACAGTATAGTTTTAGGAGGACTA
TTTAAGCTTTTTGGAGCTAGTCTAGCCTTAGGTAAAATATTTAATTTAGTACTAACTTTTTTTGGACAAGTATTATTCTT
AGGAATATTAAGAAAAATAAAAATTACAGAACGAAATAGAAAAATAGTATTTACTCTATTTGTGTTATTTCCAAATAATA
TATTCTTTAACAGTGTTTTAGGTACAGAAATATTATTTACTACATTACTTTTATTATTAACATATTTATACTTTAGTGAT
ATAAAATATAAATATGTAGTTTTAGGAGTATTAGTAGGAGCAACCACCATGGTAAAGCCATTTTTCTTATTATATGCCTT
TGCTATATTTTTAGTTGAATTATTAAAAGAAAAATCTTTTCTAAAATCTTTAAAATCAGCCATAATAATAGCTGTAGTAG
CTTTAATTACTATAAGTCCTTGGATTTATAGAAATACAAAATATAATGGAGAACGTACCTTTGTATCAAATAACGGAGGA
ATAGTACTTTATATAAATAATAATTCTGAAAACAATATGGGAAGATGGATGAGTATATATGATGTAGAAAACTCATTAGC
AGAAACAGAGGAATACAAAAAAGCTTCTTATACACAAAAAAATAAAATGCTTAATAAAGCAGCTAAAGAATGGATAAAAT
CTCATCCAAAGGAATTTGTAATATTAGGTTTTAAAAGACTCTTTAATACATATATGGTGGGAGATGACGTAGCATATAGC
ATTCATGGGGTAACTATGAATGATACTGTTAAATTTAAATTATTTGCAGCAACAAACTGTATAAGAAATATGGTTTTCAT
TCCAGCTATTATATATGTATTAATTTACAGCATTTTTATACTTATACAAATAATAAAAAGAAGAACAGAAAATCTAAATA
AATTTAATTTGTATTCTACAATTCTATTTCATATGTTTACTTCAGTATACTTTATTACTGAAGGGCAAGGCAGATATGCT
TTCCCATTAATATTTATAATTATATACTTTTGGGTTTATTTTATTAAACATGGAATACTTTTATTTAAGGAGTTAAAAAG
ATGA

Upstream 100 bases:

>100_bases
TTTTGGAAAGGACAAACCTTTTTTGGTAAATATGGTATTGTGGGTAATATCAGTAGTGGTTATAATATATTTTAAACTTT
AAGGATGGTGTATAAATGTA

Downstream 100 bases:

>100_bases
TATATTTAATATTGACATCAGTTTTTCTAGGAGCATTAGGACAAATATTGGTGAAATATGGAGCAGTTAATTTAACATTA
AATTTTTCACCAGCACACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIANGGEWGDTYTSVGYSIVLGGL
FKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNRKIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSD
IKYKYVVLGVLVGATTMVKPFFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG
IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFVILGFKRLFNTYMVGDDVAYS
IHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFILIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYA
FPLIFIIIYFWVYFIKHGILLFKELKR

Sequences:

>Translated_427_residues
MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIANGGEWGDTYTSVGYSIVLGGL
FKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNRKIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSD
IKYKYVVLGVLVGATTMVKPFFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG
IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFVILGFKRLFNTYMVGDDVAYS
IHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFILIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYA
FPLIFIIIYFWVYFIKHGILLFKELKR
>Mature_427_residues
MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIANGGEWGDTYTSVGYSIVLGGL
FKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNRKIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSD
IKYKYVVLGVLVGATTMVKPFFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG
IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFVILGFKRLFNTYMVGDDVAYS
IHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFILIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYA
FPLIFIIIYFWVYFIKHGILLFKELKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49579; Mature: 49579

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIAN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEEC
GGEWGDTYTSVGYSIVLGGLFKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSDIKYKYVVLGVLVGATTMVKP
EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCEEEEECCCC
IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFV
EEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ILGFKRLFNTYMVGDDVAYSIHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFI
EHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYAFPLIFIIIYFWVYFIKHGIL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LFKELKR
HHHHHCC
>Mature Secondary Structure
MEFNYLSGYENKDSNYSKTNYYKIIIGLSMLLCILWVIFVDTKPFSDFEYYYNLAVSIAN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEEC
GGEWGDTYTSVGYSIVLGGLFKLFGASLALGKIFNLVLTFFGQVLFLGILRKIKITERNR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KIVFTLFVLFPNNIFFNSVLGTEILFTTLLLLLTYLYFSDIKYKYVVLGVLVGATTMVKP
EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FFLLYAFAIFLVELLKEKSFLKSLKSAIIIAVVALITISPWIYRNTKYNGERTFVSNNGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCEEEEECCCC
IVLYINNNSENNMGRWMSIYDVENSLAETEEYKKASYTQKNKMLNKAAKEWIKSHPKEFV
EEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ILGFKRLFNTYMVGDDVAYSIHGVTMNDTVKFKLFAATNCIRNMVFIPAIIYVLIYSIFI
EHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LIQIIKRRTENLNKFNLYSTILFHMFTSVYFITEGQGRYAFPLIFIIIYFWVYFIKHGIL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LFKELKR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA