| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757061
Identifier: 170757061
GI number: 170757061
Start: 2768364
End: 2769104
Strand: Reverse
Name: 170757061
Synonym: CLD_1973
Alternate gene names: NA
Gene position: 2769104-2768364 (Counterclockwise)
Preceding gene: 170757461
Following gene: 170754420
Centisome position: 69.96
GC content: 22.81
Gene sequence:
>741_bases ATGTTAGAACAAGTAAAAAATAATATTGTTTTTGATGCAAATAAAATTAAATATATAAAGATAGATAGTTTTAAATCCAT AGATCACAAAATATATATGAATTTTATTAAGAATGGATTTTCATTAGTGCTAATAATAAATGTGGATAATTTTAATGATT ATGATAAAGTTTCTTATTTTTTAACGGAAAAGGAGAAAATTAAGAGGAATAAATATTTAAGAATTAAAGATAAAAAGTGT TTTTCAATAGCTCATGGACTGATTAATTATTTATATTCTAATTGGAATAATTGTGGAATGGAATATCTGTCTAGAGGAAA AGGATTTTACGGCAAACCGTTTATAAATAATGTTGATAAAATAAACTTTAATATTACCCATTCAATGAATGTTATAGGTA TTTGCATTACAAAACATTTAGTGGGGATAGATATAGAGTATATGGATAAGGGAGTTGATTATAAGAATATAATTAATAGT TTATTTAATGAAAATGATAGACGAGTAGTAGTTAAGGAGAGTGATATTTTTTTTAAATACTGGGTAGCAAAAGAAGCGTA TATTAAATTGGGTGGTAATAGTCTTAATAAGTTGTTGAAATTCTTGTATGTTAAAAGAATTTCAAATAATGTCATTGAAA TTTTTGATACTTATAATAATATCTATAAAAGAATCTATATTTTTGAGCCTGAAATTAATTATAAAGGAGGATTGGCTTTA CAATGTATTAAAACTAATTGA
Upstream 100 bases:
>100_bases TAGAAGATAAAGTAGTATAGTTCAGAAGATAAATTGCTTATTTGAATACTAGTAAAGAAAAAATTTAAAGAATGATACTT TTAAAAAATATGAGGTAATA
Downstream 100 bases:
>100_bases AGGATGGAGAGGGTTTAAATGTTTAAGTATTCCATAAAAAATTTAAGAGAAGAAGATAAGAATTTTTTTAAAGATATGAT ACCGTATTTATCACAGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphopantethiene-Protein Transferase
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MLEQVKNNIVFDANKIKYIKIDSFKSIDHKIYMNFIKNGFSLVLIINVDNFNDYDKVSYFLTEKEKIKRNKYLRIKDKKC FSIAHGLINYLYSNWNNCGMEYLSRGKGFYGKPFINNVDKINFNITHSMNVIGICITKHLVGIDIEYMDKGVDYKNIINS LFNENDRRVVVKESDIFFKYWVAKEAYIKLGGNSLNKLLKFLYVKRISNNVIEIFDTYNNIYKRIYIFEPEINYKGGLAL QCIKTN
Sequences:
>Translated_246_residues MLEQVKNNIVFDANKIKYIKIDSFKSIDHKIYMNFIKNGFSLVLIINVDNFNDYDKVSYFLTEKEKIKRNKYLRIKDKKC FSIAHGLINYLYSNWNNCGMEYLSRGKGFYGKPFINNVDKINFNITHSMNVIGICITKHLVGIDIEYMDKGVDYKNIINS LFNENDRRVVVKESDIFFKYWVAKEAYIKLGGNSLNKLLKFLYVKRISNNVIEIFDTYNNIYKRIYIFEPEINYKGGLAL QCIKTN >Mature_246_residues MLEQVKNNIVFDANKIKYIKIDSFKSIDHKIYMNFIKNGFSLVLIINVDNFNDYDKVSYFLTEKEKIKRNKYLRIKDKKC FSIAHGLINYLYSNWNNCGMEYLSRGKGFYGKPFINNVDKINFNITHSMNVIGICITKHLVGIDIEYMDKGVDYKNIINS LFNENDRRVVVKESDIFFKYWVAKEAYIKLGGNSLNKLLKFLYVKRISNNVIEIFDTYNNIYKRIYIFEPEINYKGGLAL QCIKTN
Specific function: Unknown
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29064; Mature: 29064
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQVKNNIVFDANKIKYIKIDSFKSIDHKIYMNFIKNGFSLVLIINVDNFNDYDKVSYF CCCHHHCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHEEE LTEKEKIKRNKYLRIKDKKCFSIAHGLINYLYSNWNNCGMEYLSRGKGFYGKPFINNVDK ECCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEE INFNITHSMNVIGICITKHLVGIDIEYMDKGVDYKNIINSLFNENDRRVVVKESDIFFKY EEEEEEECCCEEEEEEEHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEEEE WVAKEAYIKLGGNSLNKLLKFLYVKRISNNVIEIFDTYNNIYKRIYIFEPEINYKGGLAL EECEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHEEEEEEECCCCCCCCCEEE QCIKTN EEEECC >Mature Secondary Structure MLEQVKNNIVFDANKIKYIKIDSFKSIDHKIYMNFIKNGFSLVLIINVDNFNDYDKVSYF CCCHHHCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHEEE LTEKEKIKRNKYLRIKDKKCFSIAHGLINYLYSNWNNCGMEYLSRGKGFYGKPFINNVDK ECCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEE INFNITHSMNVIGICITKHLVGIDIEYMDKGVDYKNIINSLFNENDRRVVVKESDIFFKY EEEEEEECCCEEEEEEEHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEEEE WVAKEAYIKLGGNSLNKLLKFLYVKRISNNVIEIFDTYNNIYKRIYIFEPEINYKGGLAL EECEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHEEEEEEECCCCCCCCCEEE QCIKTN EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA