Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is yybI [H]

Identifier: 170757057

GI number: 170757057

Start: 802593

End: 803345

Strand: Direct

Name: yybI [H]

Synonym: CLD_0082

Alternate gene names: 170757057

Gene position: 802593-803345 (Clockwise)

Preceding gene: 170755319

Following gene: 170754624

Centisome position: 20.28

GC content: 28.42

Gene sequence:

>753_bases
ATGTTTTATTGTCCTTATTATTTTTTTAGAAAAAATGTGGGTAACAACAAAGTGTATATAATAGATAGAAAAAAAGGTGA
TGTAAATGGAGATAAAATAGAAGACACTATACTTTTGATAGGAAATAAACCTTCAGGTATAGACAGTCCTTTTGTAAGTA
ACATAAGGCTTGTAATAAAGGATGGAAAAACAGGTAAAGGCATTACGGTACCTCTTAAAGAAAATTCAGGTTATAATCCA
ACTATATTTTTAGGAGATTTTACAGGAGATAAAATTAAGGATATATTAGTAAGCATAGACTCTGGAGGCAGTGGAGGATT
TGGATTCTATTATATTTACTCTTTTGCAAATAATCAATTAAAACTAATTTTTGATTTTGAAAAATTTGGAGAGGAGTATA
CTTACGAGGTTAATTACAAAGATAATTATAGGGTTGAAGTTATAAGTGAAAATTTGAAAATAAAATATATAATTGATATT
ACTTATAAAGGTAAGGAATATTTAAATGAAATATATGATCTAAATGGAAAACTTAAAGAACCTATTTCAGGATTTGTTAT
TCCCTTAAGCAATTTGTATCCTATTGATTTTGAAAGAGATGGAACTTATGAACTATATGTATTTCAGAGAATAGCAGGCA
GGTATAATGCAGATGGGTTAGGATATGTTCAAACTGCCCTTAAGTGGGAAAAAGATAAATTCACTACATTCTTCCAGAAT
GTCGGCATTCAAGGAAAATATATAGGGGGATAA

Upstream 100 bases:

>100_bases
ATCAAATAGAGGGATTGTTCTTAGATTTAAATAAAATTAAGAACAGTCCCTTTATTTGGGAATAATATATAAAGTAGAAG
TATTTTTAGAGGAGACAGTT

Downstream 100 bases:

>100_bases
TCCAGTGACGTAAACTTTATAAAATTCATGTATAATATTACTGAGGAACAAAAACTTTAAATTTTTATCAAAAGGGTGTT
TGCACTATTTTTGGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MFYCPYYFFRKNVGNNKVYIIDRKKGDVNGDKIEDTILLIGNKPSGIDSPFVSNIRLVIKDGKTGKGITVPLKENSGYNP
TIFLGDFTGDKIKDILVSIDSGGSGGFGFYYIYSFANNQLKLIFDFEKFGEEYTYEVNYKDNYRVEVISENLKIKYIIDI
TYKGKEYLNEIYDLNGKLKEPISGFVIPLSNLYPIDFERDGTYELYVFQRIAGRYNADGLGYVQTALKWEKDKFTTFFQN
VGIQGKYIGG

Sequences:

>Translated_250_residues
MFYCPYYFFRKNVGNNKVYIIDRKKGDVNGDKIEDTILLIGNKPSGIDSPFVSNIRLVIKDGKTGKGITVPLKENSGYNP
TIFLGDFTGDKIKDILVSIDSGGSGGFGFYYIYSFANNQLKLIFDFEKFGEEYTYEVNYKDNYRVEVISENLKIKYIIDI
TYKGKEYLNEIYDLNGKLKEPISGFVIPLSNLYPIDFERDGTYELYVFQRIAGRYNADGLGYVQTALKWEKDKFTTFFQN
VGIQGKYIGG
>Mature_250_residues
MFYCPYYFFRKNVGNNKVYIIDRKKGDVNGDKIEDTILLIGNKPSGIDSPFVSNIRLVIKDGKTGKGITVPLKENSGYNP
TIFLGDFTGDKIKDILVSIDSGGSGGFGFYYIYSFANNQLKLIFDFEKFGEEYTYEVNYKDNYRVEVISENLKIKYIIDI
TYKGKEYLNEIYDLNGKLKEPISGFVIPLSNLYPIDFERDGTYELYVFQRIAGRYNADGLGYVQTALKWEKDKFTTFFQN
VGIQGKYIGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28645; Mature: 28645

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYCPYYFFRKNVGNNKVYIIDRKKGDVNGDKIEDTILLIGNKPSGIDSPFVSNIRLVIK
CEECCEEHEECCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEE
DGKTGKGITVPLKENSGYNPTIFLGDFTGDKIKDILVSIDSGGSGGFGFYYIYSFANNQL
CCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCEE
KLIFDFEKFGEEYTYEVNYKDNYRVEVISENLKIKYIIDITYKGKEYLNEIYDLNGKLKE
EEEEEHHHCCCEEEEEEECCCCEEEEEEECCCEEEEEEEEEECCHHHHHHHHCCCCCCCC
PISGFVIPLSNLYPIDFERDGTYELYVFQRIAGRYNADGLGYVQTALKWEKDKFTTFFQN
CCCCEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHH
VGIQGKYIGG
CCCCEEEECC
>Mature Secondary Structure
MFYCPYYFFRKNVGNNKVYIIDRKKGDVNGDKIEDTILLIGNKPSGIDSPFVSNIRLVIK
CEECCEEHEECCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEE
DGKTGKGITVPLKENSGYNPTIFLGDFTGDKIKDILVSIDSGGSGGFGFYYIYSFANNQL
CCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCEE
KLIFDFEKFGEEYTYEVNYKDNYRVEVISENLKIKYIIDITYKGKEYLNEIYDLNGKLKE
EEEEEHHHCCCEEEEEEECCCCEEEEEEECCCEEEEEEEEEECCHHHHHHHHCCCCCCCC
PISGFVIPLSNLYPIDFERDGTYELYVFQRIAGRYNADGLGYVQTALKWEKDKFTTFFQN
CCCCEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHH
VGIQGKYIGG
CCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]