| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757029
Identifier: 170757029
GI number: 170757029
Start: 874920
End: 876236
Strand: Direct
Name: 170757029
Synonym: CLD_0004
Alternate gene names: NA
Gene position: 874920-876236 (Clockwise)
Preceding gene: 170756455
Following gene: 170754723
Centisome position: 22.1
GC content: 28.85
Gene sequence:
>1317_bases ATGAATTGCAATTGTGCGTTATGCAGTAACAATAATGAATTTTATATGCCAGATGAAATATTAAAATCAGCCAAAGAAAA ACAATTAATTTTATTTTGTGGAGCAGGAATTAGTACAGAAAATAAAAATGTTTTACCATTTAATTTTTATTCTGAAATTA AAGAAGAACTTAATATAGAAAAAGATCAAAGCTTTTCTGCATTAATGAGCCAGTTTTGCTCTAAAACTAATGGTAGGAGA AAATTAATACAAAAAATTAAATCACGGTTTGATTACATAAATTCATTTTCTGAAATAGAAGGTAGTGCAACTAAGTTCCA TAGAGAGTTGGCACCTCTTTATATGATTGATACAATTATTACAACAAATTGGGATGATTATTTCGAACGATATTGTAATG CTACACCAATAACGACTACAAAAGATTTTGTTTTTTGGAACTGTTGCGATAGAAGAGTCCTAAAAATACATGGATCTATT AATAATATTGGATCTATTGTAGCCACACAAGAAGACTATAAAGAATGTGCTAAATCATTGAAAACGAATATAATAGGTTC TACGCTGAAATCTTTATTAGCAACAAAAACAGTAATTTTTATTGGATTCTCATTTGGCGATGAAGATTTTAAGCAGATTT TGGACTATGTAGTTAAAGAGATGAAAGATTATATGCCACACATTTTTGTTGTAACAACTGATGATACTTTACAAGAAAGG GTAAAATATCAAAATTTAACGGCTATCATTACTGATGGCACTTTCTTCATTCACAAATTAAAAAGTGACCTAATTAGTGA AGGATACTTACTAAATCCTGATATAGGACAAGATATTTATTATATGTACAGTTTAGTTCAAACGAAACATGAGGATTTAG TAAAACATATTGATTACATAAACTGTCCTCAAATTATATATTGTTTATCCTATCAAGATGGTATTTTGCATGCATTTGAA CGTTTCATTCAATTGGAATCTACAGGAAAGTATTATGAGCCATCACACATTAGCAAAGTTATTAAATCCTATGATTACTT ACTTGAGCAATATCAGAAATCAAATCTATATTGGGATGTTGCATATATTGAAGGGTATATAAATGCTTTAGTTTATATGT TAGCAGATGATGACGCAAAAAAAGAATTTCCGAAATTTTATTTGCCGAATGCTACAAGAGAACTAAGAACTCAAAAGGAT CTATTGGACATGATATTAGAGGTTGAAAGTATAAATGATCATTATAGAAGATATGCCAGAGAAATAGTAAAGGATTATAC AAATGATCTCGTAGTACACCATACTCCAGTACTATAA
Upstream 100 bases:
>100_bases GGAAGTTAAAATAACATGAAAATCTACTAGGATTAATATAGAGTTTATTATAGTATAAGCAGTGAAATGTTTAAATAATA ATAGTTAGGAGTGAATAAAA
Downstream 100 bases:
>100_bases TTGCGCCTTATTGAGTTGTAAATTTATAATCCAATTTAAATTTTAAGTAGTTATCTTTTATCTGACTATATACAATATGA AAAGAACAACTACAGCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MNCNCALCSNNNEFYMPDEILKSAKEKQLILFCGAGISTENKNVLPFNFYSEIKEELNIEKDQSFSALMSQFCSKTNGRR KLIQKIKSRFDYINSFSEIEGSATKFHRELAPLYMIDTIITTNWDDYFERYCNATPITTTKDFVFWNCCDRRVLKIHGSI NNIGSIVATQEDYKECAKSLKTNIIGSTLKSLLATKTVIFIGFSFGDEDFKQILDYVVKEMKDYMPHIFVVTTDDTLQER VKYQNLTAIITDGTFFIHKLKSDLISEGYLLNPDIGQDIYYMYSLVQTKHEDLVKHIDYINCPQIIYCLSYQDGILHAFE RFIQLESTGKYYEPSHISKVIKSYDYLLEQYQKSNLYWDVAYIEGYINALVYMLADDDAKKEFPKFYLPNATRELRTQKD LLDMILEVESINDHYRRYAREIVKDYTNDLVVHHTPVL
Sequences:
>Translated_438_residues MNCNCALCSNNNEFYMPDEILKSAKEKQLILFCGAGISTENKNVLPFNFYSEIKEELNIEKDQSFSALMSQFCSKTNGRR KLIQKIKSRFDYINSFSEIEGSATKFHRELAPLYMIDTIITTNWDDYFERYCNATPITTTKDFVFWNCCDRRVLKIHGSI NNIGSIVATQEDYKECAKSLKTNIIGSTLKSLLATKTVIFIGFSFGDEDFKQILDYVVKEMKDYMPHIFVVTTDDTLQER VKYQNLTAIITDGTFFIHKLKSDLISEGYLLNPDIGQDIYYMYSLVQTKHEDLVKHIDYINCPQIIYCLSYQDGILHAFE RFIQLESTGKYYEPSHISKVIKSYDYLLEQYQKSNLYWDVAYIEGYINALVYMLADDDAKKEFPKFYLPNATRELRTQKD LLDMILEVESINDHYRRYAREIVKDYTNDLVVHHTPVL >Mature_438_residues MNCNCALCSNNNEFYMPDEILKSAKEKQLILFCGAGISTENKNVLPFNFYSEIKEELNIEKDQSFSALMSQFCSKTNGRR KLIQKIKSRFDYINSFSEIEGSATKFHRELAPLYMIDTIITTNWDDYFERYCNATPITTTKDFVFWNCCDRRVLKIHGSI NNIGSIVATQEDYKECAKSLKTNIIGSTLKSLLATKTVIFIGFSFGDEDFKQILDYVVKEMKDYMPHIFVVTTDDTLQER VKYQNLTAIITDGTFFIHKLKSDLISEGYLLNPDIGQDIYYMYSLVQTKHEDLVKHIDYINCPQIIYCLSYQDGILHAFE RFIQLESTGKYYEPSHISKVIKSYDYLLEQYQKSNLYWDVAYIEGYINALVYMLADDDAKKEFPKFYLPNATRELRTQKD LLDMILEVESINDHYRRYAREIVKDYTNDLVVHHTPVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51204; Mature: 51204
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCNCALCSNNNEFYMPDEILKSAKEKQLILFCGAGISTENKNVLPFNFYSEIKEELNIE CCCCEEEECCCCCEECCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC KDQSFSALMSQFCSKTNGRRKLIQKIKSRFDYINSFSEIEGSATKFHRELAPLYMIDTII CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TTNWDDYFERYCNATPITTTKDFVFWNCCDRRVLKIHGSINNIGSIVATQEDYKECAKSL HCCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHH KTNIIGSTLKSLLATKTVIFIGFSFGDEDFKQILDYVVKEMKDYMPHIFVVTTDDTLQER HHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHH VKYQNLTAIITDGTFFIHKLKSDLISEGYLLNPDIGQDIYYMYSLVQTKHEDLVKHIDYI HHHCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC NCPQIIYCLSYQDGILHAFERFIQLESTGKYYEPSHISKVIKSYDYLLEQYQKSNLYWDV CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEH AYIEGYINALVYMLADDDAKKEFPKFYLPNATRELRTQKDLLDMILEVESINDHYRRYAR HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIVKDYTNDLVVHHTPVL HHHHHHHCCEEEECCCCC >Mature Secondary Structure MNCNCALCSNNNEFYMPDEILKSAKEKQLILFCGAGISTENKNVLPFNFYSEIKEELNIE CCCCEEEECCCCCEECCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC KDQSFSALMSQFCSKTNGRRKLIQKIKSRFDYINSFSEIEGSATKFHRELAPLYMIDTII CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TTNWDDYFERYCNATPITTTKDFVFWNCCDRRVLKIHGSINNIGSIVATQEDYKECAKSL HCCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHH KTNIIGSTLKSLLATKTVIFIGFSFGDEDFKQILDYVVKEMKDYMPHIFVVTTDDTLQER HHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHH VKYQNLTAIITDGTFFIHKLKSDLISEGYLLNPDIGQDIYYMYSLVQTKHEDLVKHIDYI HHHCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC NCPQIIYCLSYQDGILHAFERFIQLESTGKYYEPSHISKVIKSYDYLLEQYQKSNLYWDV CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEH AYIEGYINALVYMLADDDAKKEFPKFYLPNATRELRTQKDLLDMILEVESINDHYRRYAR HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIVKDYTNDLVVHHTPVL HHHHHHHCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA