| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754723
Identifier: 170754723
GI number: 170754723
Start: 876396
End: 877541
Strand: Direct
Name: 170754723
Synonym: CLD_0003
Alternate gene names: NA
Gene position: 876396-877541 (Clockwise)
Preceding gene: 170757029
Following gene: 170755744
Centisome position: 22.14
GC content: 31.94
Gene sequence:
>1146_bases ATGGAATACCCTGATGAAGCTGTTGCTTTTTTAGACCGAAAAAGTTGCAGTAACTTATATTCATTAATTAAAACCGTTAA TAATAGTCAGTGTAGTTTAGTATTGGGAGCTGGCGTATCTGCATCAGTAGGACTTCCAACATGGGACAAATTGTTAAAAC GCATTTGCTATACATTTTTTACTCATTGGGTGTTTGAAGTATGCAACGAAAAAAATGGATGTACATACGATAGTCCACCC AAAAATATTTCTGTAACATTTACACAAAGTTATGATTTATATGAATTTGAAAAGCAAATGGGGAGAACAGTTGATAGCCT TGATTATTCTAAAGTTGTTGAAGTATATTCGGGCGGAATAAAATGGAGTACGAAAGAGGTACAAGAAGCTTTGAACAGGA TGAACGAAGAAGAGCATTTAAAAAAAACATTACAAGATGATTTTATGACTAAAATAATGGAGAGAGATCCAACACTAATT GCACAAATGATTAAAAACCGCATAAGGAAAGTGGATTGGGATTATTTGGTTAGGAAATCATTATATAACTCTTATGAAGA TATGCCATATAAACTAGAAAAATCTTTTCTTTACGATAGCATTATTTCATTTATTTCTAATGCAAAAATTTCTAAAATCA TTAACTATAATTATGATGACACCTTATATCATTCATTAAGAGAGGTTGGTCAGTTCTTTAAAAATATATATCAGGGCACC TCAACTTTTGGGAAATATTCGATTTTTTATCCACACGGGTATATTCCTATGAAAGGTGGGGTAAACACAGAAATAGTTTT AACAGAACAAGACTATCAAAATCAAGGGATGCAAATGAATCTGTGGTCAAATAATATACAAATAAGTACATATTGTTCTA CTAATTGTATTTTTGTTGGACTTTCTCTATCTGATGCAAACTTGCGTAGAATTTTAAATATGTGTCGTGATTCTTCACAA AGTTTACACTATGCGTTTTTGGCTCGCAGTGGCGATGACCCAACATCAAGAATGATTGATAGTTTATTTGATGAGGATTT ATACCGATTAGGTATAAAGGTCATACGCTACCCACTGACTAACAATGAAAATCCACATGAATTACTTCCTAAACTGTTGG ACTTTATTTCTGATAATATGAAGTAA
Upstream 100 bases:
>100_bases ATCTGACTATATACAATATGAAAAGAACAACTACAGCTTGTCCATATACCCATTAGGCTAATAATGAGAAGTAGACACTA GAATGAGAGGAGATGCTTAT
Downstream 100 bases:
>100_bases GAATCAATTGTATTATATAATCTACTTGTTTCGTAAATATATTAATAGTAGGAACAATTATCATTGGAAATCAAAATGGA TTTATTATATTTTATCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MEYPDEAVAFLDRKSCSNLYSLIKTVNNSQCSLVLGAGVSASVGLPTWDKLLKRICYTFFTHWVFEVCNEKNGCTYDSPP KNISVTFTQSYDLYEFEKQMGRTVDSLDYSKVVEVYSGGIKWSTKEVQEALNRMNEEEHLKKTLQDDFMTKIMERDPTLI AQMIKNRIRKVDWDYLVRKSLYNSYEDMPYKLEKSFLYDSIISFISNAKISKIINYNYDDTLYHSLREVGQFFKNIYQGT STFGKYSIFYPHGYIPMKGGVNTEIVLTEQDYQNQGMQMNLWSNNIQISTYCSTNCIFVGLSLSDANLRRILNMCRDSSQ SLHYAFLARSGDDPTSRMIDSLFDEDLYRLGIKVIRYPLTNNENPHELLPKLLDFISDNMK
Sequences:
>Translated_381_residues MEYPDEAVAFLDRKSCSNLYSLIKTVNNSQCSLVLGAGVSASVGLPTWDKLLKRICYTFFTHWVFEVCNEKNGCTYDSPP KNISVTFTQSYDLYEFEKQMGRTVDSLDYSKVVEVYSGGIKWSTKEVQEALNRMNEEEHLKKTLQDDFMTKIMERDPTLI AQMIKNRIRKVDWDYLVRKSLYNSYEDMPYKLEKSFLYDSIISFISNAKISKIINYNYDDTLYHSLREVGQFFKNIYQGT STFGKYSIFYPHGYIPMKGGVNTEIVLTEQDYQNQGMQMNLWSNNIQISTYCSTNCIFVGLSLSDANLRRILNMCRDSSQ SLHYAFLARSGDDPTSRMIDSLFDEDLYRLGIKVIRYPLTNNENPHELLPKLLDFISDNMK >Mature_381_residues MEYPDEAVAFLDRKSCSNLYSLIKTVNNSQCSLVLGAGVSASVGLPTWDKLLKRICYTFFTHWVFEVCNEKNGCTYDSPP KNISVTFTQSYDLYEFEKQMGRTVDSLDYSKVVEVYSGGIKWSTKEVQEALNRMNEEEHLKKTLQDDFMTKIMERDPTLI AQMIKNRIRKVDWDYLVRKSLYNSYEDMPYKLEKSFLYDSIISFISNAKISKIINYNYDDTLYHSLREVGQFFKNIYQGT STFGKYSIFYPHGYIPMKGGVNTEIVLTEQDYQNQGMQMNLWSNNIQISTYCSTNCIFVGLSLSDANLRRILNMCRDSSQ SLHYAFLARSGDDPTSRMIDSLFDEDLYRLGIKVIRYPLTNNENPHELLPKLLDFISDNMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44283; Mature: 44283
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYPDEAVAFLDRKSCSNLYSLIKTVNNSQCSLVLGAGVSASVGLPTWDKLLKRICYTFF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH THWVFEVCNEKNGCTYDSPPKNISVTFTQSYDLYEFEKQMGRTVDSLDYSKVVEVYSGGI HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHCHHHHHHHHHCCCC KWSTKEVQEALNRMNEEEHLKKTLQDDFMTKIMERDPTLIAQMIKNRIRKVDWDYLVRKS CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH LYNSYEDMPYKLEKSFLYDSIISFISNAKISKIINYNYDDTLYHSLREVGQFFKNIYQGT HHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC STFGKYSIFYPHGYIPMKGGVNTEIVLTEQDYQNQGMQMNLWSNNIQISTYCSTNCIFVG CCCCCEEEEECCCCEECCCCCCEEEEEECCCHHHCCCEEEEECCCEEEEEEECCCEEEEE LSLSDANLRRILNMCRDSSQSLHYAFLARSGDDPTSRMIDSLFDEDLYRLGIKVIRYPLT EECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCC NNENPHELLPKLLDFISDNMK CCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEYPDEAVAFLDRKSCSNLYSLIKTVNNSQCSLVLGAGVSASVGLPTWDKLLKRICYTFF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH THWVFEVCNEKNGCTYDSPPKNISVTFTQSYDLYEFEKQMGRTVDSLDYSKVVEVYSGGI HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHCHHHHHHHHHCCCC KWSTKEVQEALNRMNEEEHLKKTLQDDFMTKIMERDPTLIAQMIKNRIRKVDWDYLVRKS CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH LYNSYEDMPYKLEKSFLYDSIISFISNAKISKIINYNYDDTLYHSLREVGQFFKNIYQGT HHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC STFGKYSIFYPHGYIPMKGGVNTEIVLTEQDYQNQGMQMNLWSNNIQISTYCSTNCIFVG CCCCCEEEEECCCCEECCCCCCEEEEEECCCHHHCCCEEEEECCCEEEEEEECCCEEEEE LSLSDANLRRILNMCRDSSQSLHYAFLARSGDDPTSRMIDSLFDEDLYRLGIKVIRYPLT EECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCC NNENPHELLPKLLDFISDNMK CCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA