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The map label for this gene is xdhB [H]

Identifier: 170756969

GI number: 170756969

Start: 3051635

End: 3052465

Strand: Reverse

Name: xdhB [H]

Synonym: CLD_1719

Alternate gene names: 170756969

Gene position: 3052465-3051635 (Counterclockwise)

Preceding gene: 170755658

Following gene: 170756800

Centisome position: 77.12

GC content: 29.96

Gene sequence:

>831_bases
ATGATACCCTTTGATTTTGAATATTATAAACCTGAAACTATTGAAGAGGCAGTTCAATTATATGCTAAATTAAATGCTAG
AGGAAAAAAGCCCTTATATTTCGGCGGTGGAACTGAGATTATAAGTATGGCAAGAGCACATAATGTATATACTGAGGCAG
TAATTGATGTAAAGGGTGTTTCTGAATGTAATGTTCAGGAATTAAGAAATAACAAATTGATTATTGGTTCTGCTGTTACA
CTTACGCAAATTGCTGAAGCAAACTTATTCCCTTTACTTGGATTAACAGTACAAAGGATTGCAGATCATACTATACAAGA
TAAAATTACACTTGGGGGAAATATAGCGGGAACAATTATATATAGGGAAGCTGTATTACCTCTTTTAATATCTAATGCTG
AAATTCTTATAGCAGGTTCAAGTGGACAAAAACAAGTTTTACTAAAGGATATATTTGATAAAAGAATACGACTTAATTAT
GGAGAATTTATAGTAAATGTATCAGTAGATAGCCATTTTCTTTCGCTGCCATCTTTACATGTAAAAAGAACTAAAAATGA
TAAAATAGACTATCCACTAATTACTCTTGCGGCACTGAAAGATAATAATAGAATAAATATATCCTTTAGTGGAGTTTGTG
ATTATCCATTTAGATTTTCTTTAATTGAAGATTATTTAAATGATGCCAGCTTGGCTAATAATATAAGAATTAACAATTCA
ATAAATAGTATACCAGATGTAATATTAAATGATTTAGCTGGATCTGCTGGTTTTAGAAAATTTATGTTACAAAAAATGCT
TGCAGAAGTTTTAGAGAAACTGGAGGGATAA

Upstream 100 bases:

>100_bases
CTACATTCGCAAATGCTATATCACATGCAGCTGGGCATGAATTTGATAAACTACCTATAACACCTGAAATAATTTGGAAT
GCTAAGACTGGAGGGAAAAT

Downstream 100 bases:

>100_bases
GTGAATGATGGAGGTACTTAGTAAAACAATAATAACCTTAAATATTAATGGAGAATATAAAGAAGTTGTCGCAAAACCCT
CAGACATTTTACTGCACACC

Product: xanthine dehydrogenase family protein, FAD-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MIPFDFEYYKPETIEEAVQLYAKLNARGKKPLYFGGGTEIISMARAHNVYTEAVIDVKGVSECNVQELRNNKLIIGSAVT
LTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTIIYREAVLPLLISNAEILIAGSSGQKQVLLKDIFDKRIRLNY
GEFIVNVSVDSHFLSLPSLHVKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRFSLIEDYLNDASLANNIRINNS
INSIPDVILNDLAGSAGFRKFMLQKMLAEVLEKLEG

Sequences:

>Translated_276_residues
MIPFDFEYYKPETIEEAVQLYAKLNARGKKPLYFGGGTEIISMARAHNVYTEAVIDVKGVSECNVQELRNNKLIIGSAVT
LTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTIIYREAVLPLLISNAEILIAGSSGQKQVLLKDIFDKRIRLNY
GEFIVNVSVDSHFLSLPSLHVKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRFSLIEDYLNDASLANNIRINNS
INSIPDVILNDLAGSAGFRKFMLQKMLAEVLEKLEG
>Mature_276_residues
MIPFDFEYYKPETIEEAVQLYAKLNARGKKPLYFGGGTEIISMARAHNVYTEAVIDVKGVSECNVQELRNNKLIIGSAVT
LTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTIIYREAVLPLLISNAEILIAGSSGQKQVLLKDIFDKRIRLNY
GEFIVNVSVDSHFLSLPSLHVKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRFSLIEDYLNDASLANNIRINNS
INSIPDVILNDLAGSAGFRKFMLQKMLAEVLEKLEG

Specific function: Presumed to be a dehydrogenase, but possibly an oxidase. Participates in limited purine salvage (requires aspartate) but does not support aerobic growth on purines as the sole carbon source (purine catabolism) [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789231, Length=294, Percent_Identity=25.8503401360544, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 30706; Mature: 30706

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFDFEYYKPETIEEAVQLYAKLNARGKKPLYFGGGTEIISMARAHNVYTEAVIDVKGV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCC
SECNVQELRNNKLIIGSAVTLTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTII
CCCCHHHHCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEECCCEEEEEE
YREAVLPLLISNAEILIAGSSGQKQVLLKDIFDKRIRLNYGEFIVNVSVDSHFLSLPSLH
EHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHEEEECCEEEEEEECCEEECCCCEE
VKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRFSLIEDYLNDASLANNIRINNS
EEECCCCCCCCCEEEEEEECCCCEEEEEECCEECCCCHHHHHHHHHCCHHHHCCEEECCC
INSIPDVILNDLAGSAGFRKFMLQKMLAEVLEKLEG
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPFDFEYYKPETIEEAVQLYAKLNARGKKPLYFGGGTEIISMARAHNVYTEAVIDVKGV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCC
SECNVQELRNNKLIIGSAVTLTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTII
CCCCHHHHCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEECCCEEEEEE
YREAVLPLLISNAEILIAGSSGQKQVLLKDIFDKRIRLNYGEFIVNVSVDSHFLSLPSLH
EHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHEEEECCEEEEEEECCEEECCCCEE
VKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRFSLIEDYLNDASLANNIRINNS
EEECCCCCCCCCEEEEEEECCCCEEEEEECCEECCCCHHHHHHHHHCCHHHHCCEEECCC
INSIPDVILNDLAGSAGFRKFMLQKMLAEVLEKLEG
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]