| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is hcrA [H]
Identifier: 170755658
GI number: 170755658
Start: 3052462
End: 3054792
Strand: Reverse
Name: hcrA [H]
Synonym: CLD_1718
Alternate gene names: 170755658
Gene position: 3054792-3052462 (Counterclockwise)
Preceding gene: 170757789
Following gene: 170756969
Centisome position: 77.18
GC content: 36.51
Gene sequence:
>2331_bases TTGAGTAATACAATTGGGGTAAGCATACCAAGAAAAGAGGCTTTTGATAAAGTTACAGGTACAGCAAAATATACTGATGA TACACTTCTTCCTGGCACTTTGCATGCTAAAATGCTCACAAGTCGTTATGCACATGCAAAGATTAAATCACTTGATATAG CTGAAGCTAAGAAAGCATTAGGTGTTCAAGCAGTAATAACAGGTGATTATCTTCCTATACTTTCTGGATCAGTAATAGAA GATAGACCCCCAATAGCGAGAGATAGAGTACGTTACTTTGGAGAACCTGTTGCAGTAGTAATTGCAAATAGTGAGCAAGA AGCAATGAAAGCTGTAAAGCTAATAAATGTAGAATATGAACCATTACCTGTTGTTAATTCAATAAGTGATTCTTTGAAGC CAGGTGCTACTCTTATACATGAAAATTTAGGGCAGTATAATCATGCGGTAAATGATGTATATCCTGAACTAAATACTAAT ATTTTAGATCGAATAAAAATAAGAAAAGGTGATATGGGAAAGGGTTGGGCAGAAAGCGAAGTTATAGTAGAAGGAAATTT TTCACTTCCACAATCAGATCATCTTGCAATGGAAACTAGAAGTGCGAAAGCTCAAATTATGCCAGACGGAAAAATAATAA TTTATACTTCTTCACAAGGGCCTTATTCTGTTAAGAGGCGTTTAAGTAAGATTTATAATATACCAGAAGGAAATATAGTT GTTAAAGTACCATTTGTAGGTGGAGGATTTGGCGGCAAGGCAGCTACTCAATTGGAATTTATTGCATACCTGGCTTCCAA GGCTGTTAATGGTAGATTAGTTACTATAACCAATTCAAGAGAAGAGGATATTAAAACTTCACCCTGTAGAATTGGAGTTG AGGGAAATTTAAAAATAGGTGCAACAAAAGATGGAATTATTAAAGTACTTGAAGCTAAATATGCGGTTGATAGCGGAGCT TATGCAGACACTGGTCCACGTATGGCTAAGGCTATGGCAATAGATTGTTCTGGCCCATATAATATTGAAAATATATGGTG TGATTCAATATGTGTTTATACTAATCATACCTATGTTACTTCTTATCGTGGATTTGGTCATACAGAGTATACCTTTTGCA TGGAGAGAATGATGGATAAGTTGGCAACAAAGCTTGGTATGGATCCTCTAGAATTAAGAATTAACAATGCTATGAAACCC GGACAATACACCCCAACACAAGTAAAAACAACTTTAAGTAATATAGGCAAATTGGAAGATTGCTTGACAAAATTAAAGGA GTTAGCTAAATGGGATGAAGGACAGGTAATAAAAACAGGAGACGGTATGATAAAGGCAAAGGGAATGGGCTGCTTTTGGA AAACATCTGATTCGCCTGCGGATGCTGTTTCTGGAGCTTTTCTTACTTTCAATACAGATGGAAGCATAAATCTTAATACT GGTGCAGTCGAAATTGGACCGTCTACAAAGACTACTTTAGCCCAAATACTTGCTGAGAAATTGAAAATGGATGTAAGTAG AATTCATGTAGTGATGGGAGTGGATACTCAAGTTTCACCAGAACATTGGAAAACAGTTGCAAGTATGACAACTTTTATGG CAGGCAGGGCAGTTCTTAGAGCTGCTGAAGATCTTATAAGGCAGCTGAAAAGTTTAGCAGCTACTGTTATGAAATCTCCA CCAGAAGATTTAGAAGTTGCAGAAGAAAAGGTATATTTAAGACAAGATCCAGAAATATATGTTTCATTCAAGGATTTAGC TAGAGGTTATAAAGAGTTTAATGGTCTCGCAATTGACGGACAAATACTTGCACGTGGGACCTTTATAATGAGTCATATTA CTAATATGGATAAAGAAACAGGAAAAGGTAAACCCGGACCAGCGTGGACTGTAGGTGCTCAAGCAGTTGAGATTGAATAT GATCCTAATAAGTTCACATATAGACTTTTAAAAGCAATTACTGTTGTAGATGCAGGTAAAGTTATTAATCCCAAAACCTC AAAAGGATTAATAATGGGAGGTATGAATATTGGACTTGGTATAGCTACTAGAGAAGCTTTTACATATGATAGGAACGCTA GGCTACAGACCACTACATTGAGAACTTATAAGTTAATGAGATTCGGAGAAAATCCAGAATACGCGGTTGATTTCGTTGAA ACTCCCCAAATTGATGCACCTTTCGGAGCTCGTGGATTTGCAGAACATGGAATAATAGCAATTCCAGCTACATTCGCAAA TGCTATATCACATGCAGCTGGGCATGAATTTGATAAACTACCTATAACACCTGAAATAATTTGGAATGCTAAGACTGGAG GGAAAATATGA
Upstream 100 bases:
>100_bases TATATTGAATAAATTACCGAAAAGCAGGTAAAAATAAAATTAATTTAAAAATTACATAAGTTAATTTTTTAGTCCTGTTT TTAGAAGGAGGTAAGAGCAT
Downstream 100 bases:
>100_bases TACCCTTTGATTTTGAATATTATAAACCTGAAACTATTGAAGAGGCAGTTCAATTATATGCTAAATTAAATGCTAGAGGA AAAAAGCCCTTATATTTCGG
Product: xanthine dehydrogenase family protein, molybdopterin-binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 776; Mature: 775
Protein sequence:
>776_residues MSNTIGVSIPRKEAFDKVTGTAKYTDDTLLPGTLHAKMLTSRYAHAKIKSLDIAEAKKALGVQAVITGDYLPILSGSVIE DRPPIARDRVRYFGEPVAVVIANSEQEAMKAVKLINVEYEPLPVVNSISDSLKPGATLIHENLGQYNHAVNDVYPELNTN ILDRIKIRKGDMGKGWAESEVIVEGNFSLPQSDHLAMETRSAKAQIMPDGKIIIYTSSQGPYSVKRRLSKIYNIPEGNIV VKVPFVGGGFGGKAATQLEFIAYLASKAVNGRLVTITNSREEDIKTSPCRIGVEGNLKIGATKDGIIKVLEAKYAVDSGA YADTGPRMAKAMAIDCSGPYNIENIWCDSICVYTNHTYVTSYRGFGHTEYTFCMERMMDKLATKLGMDPLELRINNAMKP GQYTPTQVKTTLSNIGKLEDCLTKLKELAKWDEGQVIKTGDGMIKAKGMGCFWKTSDSPADAVSGAFLTFNTDGSINLNT GAVEIGPSTKTTLAQILAEKLKMDVSRIHVVMGVDTQVSPEHWKTVASMTTFMAGRAVLRAAEDLIRQLKSLAATVMKSP PEDLEVAEEKVYLRQDPEIYVSFKDLARGYKEFNGLAIDGQILARGTFIMSHITNMDKETGKGKPGPAWTVGAQAVEIEY DPNKFTYRLLKAITVVDAGKVINPKTSKGLIMGGMNIGLGIATREAFTYDRNARLQTTTLRTYKLMRFGENPEYAVDFVE TPQIDAPFGARGFAEHGIIAIPATFANAISHAAGHEFDKLPITPEIIWNAKTGGKI
Sequences:
>Translated_776_residues MSNTIGVSIPRKEAFDKVTGTAKYTDDTLLPGTLHAKMLTSRYAHAKIKSLDIAEAKKALGVQAVITGDYLPILSGSVIE DRPPIARDRVRYFGEPVAVVIANSEQEAMKAVKLINVEYEPLPVVNSISDSLKPGATLIHENLGQYNHAVNDVYPELNTN ILDRIKIRKGDMGKGWAESEVIVEGNFSLPQSDHLAMETRSAKAQIMPDGKIIIYTSSQGPYSVKRRLSKIYNIPEGNIV VKVPFVGGGFGGKAATQLEFIAYLASKAVNGRLVTITNSREEDIKTSPCRIGVEGNLKIGATKDGIIKVLEAKYAVDSGA YADTGPRMAKAMAIDCSGPYNIENIWCDSICVYTNHTYVTSYRGFGHTEYTFCMERMMDKLATKLGMDPLELRINNAMKP GQYTPTQVKTTLSNIGKLEDCLTKLKELAKWDEGQVIKTGDGMIKAKGMGCFWKTSDSPADAVSGAFLTFNTDGSINLNT GAVEIGPSTKTTLAQILAEKLKMDVSRIHVVMGVDTQVSPEHWKTVASMTTFMAGRAVLRAAEDLIRQLKSLAATVMKSP PEDLEVAEEKVYLRQDPEIYVSFKDLARGYKEFNGLAIDGQILARGTFIMSHITNMDKETGKGKPGPAWTVGAQAVEIEY DPNKFTYRLLKAITVVDAGKVINPKTSKGLIMGGMNIGLGIATREAFTYDRNARLQTTTLRTYKLMRFGENPEYAVDFVE TPQIDAPFGARGFAEHGIIAIPATFANAISHAAGHEFDKLPITPEIIWNAKTGGKI >Mature_775_residues SNTIGVSIPRKEAFDKVTGTAKYTDDTLLPGTLHAKMLTSRYAHAKIKSLDIAEAKKALGVQAVITGDYLPILSGSVIED RPPIARDRVRYFGEPVAVVIANSEQEAMKAVKLINVEYEPLPVVNSISDSLKPGATLIHENLGQYNHAVNDVYPELNTNI LDRIKIRKGDMGKGWAESEVIVEGNFSLPQSDHLAMETRSAKAQIMPDGKIIIYTSSQGPYSVKRRLSKIYNIPEGNIVV KVPFVGGGFGGKAATQLEFIAYLASKAVNGRLVTITNSREEDIKTSPCRIGVEGNLKIGATKDGIIKVLEAKYAVDSGAY ADTGPRMAKAMAIDCSGPYNIENIWCDSICVYTNHTYVTSYRGFGHTEYTFCMERMMDKLATKLGMDPLELRINNAMKPG QYTPTQVKTTLSNIGKLEDCLTKLKELAKWDEGQVIKTGDGMIKAKGMGCFWKTSDSPADAVSGAFLTFNTDGSINLNTG AVEIGPSTKTTLAQILAEKLKMDVSRIHVVMGVDTQVSPEHWKTVASMTTFMAGRAVLRAAEDLIRQLKSLAATVMKSPP EDLEVAEEKVYLRQDPEIYVSFKDLARGYKEFNGLAIDGQILARGTFIMSHITNMDKETGKGKPGPAWTVGAQAVEIEYD PNKFTYRLLKAITVVDAGKVINPKTSKGLIMGGMNIGLGIATREAFTYDRNARLQTTTLRTYKLMRFGENPEYAVDFVET PQIDAPFGARGFAEHGIIAIPATFANAISHAAGHEFDKLPITPEIIWNAKTGGKI
Specific function: Catalyzes reductive dehydroxylation of 4-hydroxybenzoyl- CoA. Reaction is not reversible [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To xanthine oxidases [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=799, Percent_Identity=26.9086357947434, Blast_Score=214, Evalue=3e-55, Organism=Homo sapiens, GI71773480, Length=765, Percent_Identity=25.4901960784314, Blast_Score=196, Evalue=6e-50, Organism=Escherichia coli, GI1789230, Length=777, Percent_Identity=28.1853281853282, Blast_Score=289, Evalue=4e-79, Organism=Escherichia coli, GI1789246, Length=816, Percent_Identity=27.2058823529412, Blast_Score=247, Evalue=2e-66, Organism=Escherichia coli, GI1786478, Length=762, Percent_Identity=22.3097112860892, Blast_Score=120, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17540638, Length=682, Percent_Identity=25.9530791788856, Blast_Score=165, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17539860, Length=761, Percent_Identity=23.6530880420499, Blast_Score=140, Evalue=4e-33, Organism=Caenorhabditis elegans, GI32566215, Length=753, Percent_Identity=23.1075697211155, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI17737937, Length=773, Percent_Identity=24.9676584734799, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI24647193, Length=714, Percent_Identity=21.4285714285714, Blast_Score=94, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017607 - InterPro: IPR000674 - InterPro: IPR008274 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.20 [H]
Molecular weight: Translated: 84736; Mature: 84605
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTIGVSIPRKEAFDKVTGTAKYTDDTLLPGTLHAKMLTSRYAHAKIKSLDIAEAKKAL CCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHC GVQAVITGDYLPILSGSVIEDRPPIARDRVRYFGEPVAVVIANSEQEAMKAVKLINVEYE CEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHEECCCC PLPVVNSISDSLKPGATLIHENLGQYNHAVNDVYPELNTNILDRIKIRKGDMGKGWAESE CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCCCCCE VIVEGNFSLPQSDHLAMETRSAKAQIMPDGKIIIYTSSQGPYSVKRRLSKIYNIPEGNIV EEEECCCCCCCCCCEEEECCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEE VKVPFVGGGFGGKAATQLEFIAYLASKAVNGRLVTITNSREEDIKTSPCRIGVEGNLKIG EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEC ATKDGIIKVLEAKYAVDSGAYADTGPRMAKAMAIDCSGPYNIENIWCDSICVYTNHTYVT CCCCHHHHHHHHHHHCCCCCCCCCCCHHEEEEEEECCCCCCCCEEEECCEEEEECCEEEE SYRGFGHTEYTFCMERMMDKLATKLGMDPLELRINNAMKPGQYTPTQVKTTLSNIGKLED EECCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHH CLTKLKELAKWDEGQVIKTGDGMIKAKGMGCFWKTSDSPADAVSGAFLTFNTDGSINLNT HHHHHHHHHCCCCCCEEECCCCEEEECCCEEEEECCCCCHHHHCCEEEEEECCCCEEECC GAVEIGPSTKTTLAQILAEKLKMDVSRIHVVMGVDTQVSPEHWKTVASMTTFMAGRAVLR CEEEECCCCHHHHHHHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH AAEDLIRQLKSLAATVMKSPPEDLEVAEEKVYLRQDPEIYVSFKDLARGYKEFNGLAIDG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHCCEEECC QILARGTFIMSHITNMDKETGKGKPGPAWTVGAQAVEIEYDPNKFTYRLLKAITVVDAGK EEEEHHHHHHHHHHCCCHHCCCCCCCCCEEECCEEEEEEECCCHHHHHHHHHHHHCCCCC VINPKTSKGLIMGGMNIGLGIATREAFTYDRNARLQTTTLRTYKLMRFGENPEYAVDFVE EECCCCCCCEEEECCCCCCEEEECHHEEECCCCEEEEEHHHHEEEECCCCCCCEEEEEEC TPQIDAPFGARGFAEHGIIAIPATFANAISHAAGHEFDKLPITPEIIWNAKTGGKI CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCC >Mature Secondary Structure SNTIGVSIPRKEAFDKVTGTAKYTDDTLLPGTLHAKMLTSRYAHAKIKSLDIAEAKKAL CCCEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHC GVQAVITGDYLPILSGSVIEDRPPIARDRVRYFGEPVAVVIANSEQEAMKAVKLINVEYE CEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHEECCCC PLPVVNSISDSLKPGATLIHENLGQYNHAVNDVYPELNTNILDRIKIRKGDMGKGWAESE CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCCCCCE VIVEGNFSLPQSDHLAMETRSAKAQIMPDGKIIIYTSSQGPYSVKRRLSKIYNIPEGNIV EEEECCCCCCCCCCEEEECCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEE VKVPFVGGGFGGKAATQLEFIAYLASKAVNGRLVTITNSREEDIKTSPCRIGVEGNLKIG EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEC ATKDGIIKVLEAKYAVDSGAYADTGPRMAKAMAIDCSGPYNIENIWCDSICVYTNHTYVT CCCCHHHHHHHHHHHCCCCCCCCCCCHHEEEEEEECCCCCCCCEEEECCEEEEECCEEEE SYRGFGHTEYTFCMERMMDKLATKLGMDPLELRINNAMKPGQYTPTQVKTTLSNIGKLED EECCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHH CLTKLKELAKWDEGQVIKTGDGMIKAKGMGCFWKTSDSPADAVSGAFLTFNTDGSINLNT HHHHHHHHHCCCCCCEEECCCCEEEECCCEEEEECCCCCHHHHCCEEEEEECCCCEEECC GAVEIGPSTKTTLAQILAEKLKMDVSRIHVVMGVDTQVSPEHWKTVASMTTFMAGRAVLR CEEEECCCCHHHHHHHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH AAEDLIRQLKSLAATVMKSPPEDLEVAEEKVYLRQDPEIYVSFKDLARGYKEFNGLAIDG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHCCEEECC QILARGTFIMSHITNMDKETGKGKPGPAWTVGAQAVEIEYDPNKFTYRLLKAITVVDAGK EEEEHHHHHHHHHHCCCHHCCCCCCCCCEEECCEEEEEEECCCHHHHHHHHHHHHCCCCC VINPKTSKGLIMGGMNIGLGIATREAFTYDRNARLQTTTLRTYKLMRFGENPEYAVDFVE EECCCCCCCEEEECCCCCCEEEECHHEEECCCCEEEEEHHHHEEEECCCCCCCEEEEEEC TPQIDAPFGARGFAEHGIIAIPATFANAISHAAGHEFDKLPITPEIIWNAKTGGKI CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]