Click here to switch to the map view.

The map label for this gene is xylP [H]

Identifier: 170756899

GI number: 170756899

Start: 1329748

End: 1331124

Strand: Direct

Name: xylP [H]

Synonym: CLD_3369

Alternate gene names: 170756899

Gene position: 1329748-1331124 (Clockwise)

Preceding gene: 170754724

Following gene: 170755807

Centisome position: 33.59

GC content: 28.54

Gene sequence:

>1377_bases
GTGAACATAACAAATTATAAAATTAATAATAATACCAATAAAGAAATCATTAATTTTTCTGAGAAACTTGGATATGGATT
AGGAGATTTTGCATGTAATTTGGTTTGGAATTCACTCAGTATGTTTATATTATATTTCTATACTGATGTTATGGGAATGA
AGGCAGCGATAATAAGTACACTGATGTTAGTTGTTCGTATACTTGCAGGGTTTATGGATATTGCTTCAGGAATTGTAGTT
GATAAAACGAAAACAAAGTATGGTAAAGCTAGACCATGGATTTTATGGATGGCAATTCCTTTTGGAATAAGTACAATATT
ACTTTTTTCTATTCCTAATATAGGGGGAAGTGGTAAGTTAGCTTATGTTGTTATGACCTATGTATTATTAAATGTAATTT
ACACAGCAATAAATATTCCATATGGTGTATTAAATTCTTTAATGACCCAAGATCAAAATGAAAGGTCAGAAATTAATATT
TATAGAATGTTTTGCTCAACTGCTGGATCACTTTGTGTCAGTGTTTTAGTTTTACCTCTTGTATCTTTATTTGGAGGAGA
ACAAAGTGCATGGATCATAACCTTTGCTATATTTGGTATAGTTGCGACATTTATGTTCTTTCTTACATTTAAGACAACAA
AAGAAAGAGTTACAGCAGTGAATGAAGAACAATCGCAAAATATTTCCTTTAAAGATGGAATGAAAGCTTTAATTCAAAAT
AAATATTGGATAATTATAGTTTTATTATTAGTTGTACTCTTTATGAATATGGGAATTATGGGTGGAAGTATGATTTATTA
CGCTCAGTATATACTGAATGATAAGAAGTTAGTCGCAGGATTATCAATAGCACAAAATATTCCTACACTGATTGTTATGT
TAACTATTGCGATGACATTAATAAAAAAGTATGGTAAAAGGAATACTGCAATTTTGGGCTCTATTATTTTTATTTTAGGT
TCATTATTTGCTCTAATAGATTTAACAAGCGTTAAGTTAATTTATATTTCTATCATTGTAAAAGGAACTGGAAACGCGTT
AATTTCTGCTACTGTTTTTGCTTTATTAGCAGATACAATTGAATATGGCGAATGGAAAACAAATGTTAGAACAGAAGGGC
TAGTTTATAGTGCAGGAAACTTTGGATTAAAAATTGGAATTGGATTGGGTACAGCAATTGTAGGATGGTTATTAGCATTT
AGTAATTATAATGGATCATCTAAAATTCAAACAGGTACAGCTATAAATGCTATTAACATTTTATTTATATGGTTACCAAT
GATTTTATCAGGTGTACAAATTATTTTACTTAAATTTTATAAGTTAGATAAAATATACCCAAGTATTATTAGCGATTTAG
AAAAAAGAAAGATATAG

Upstream 100 bases:

>100_bases
ACACTTATTGTTAACGTTAATATAGTATTCTAAAAATAAATTTTGTGGCTATCTTTGTGCAAAATAAAATGATTTATAAA
TCAAAGGAGGAGGGATATAG

Downstream 100 bases:

>100_bases
AAGGGGGAAGAATATGAAATTTATACATTATAAAACTACTAAAAAAGATAAATTTTTAAAAAATGAAATTAATAATACTA
CAGATGGAAGACCAACATTG

Product: sugar transporter

Products: NA

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MNITNYKINNNTNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIISTLMLVVRILAGFMDIASGIVV
DKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGGSGKLAYVVMTYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINI
YRMFCSTAGSLCVSVLVLPLVSLFGGEQSAWIITFAIFGIVATFMFFLTFKTTKERVTAVNEEQSQNISFKDGMKALIQN
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNDKKLVAGLSIAQNIPTLIVMLTIAMTLIKKYGKRNTAILGSIIFILG
SLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAF
SNYNGSSKIQTGTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPSIISDLEKRKI

Sequences:

>Translated_458_residues
MNITNYKINNNTNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIISTLMLVVRILAGFMDIASGIVV
DKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGGSGKLAYVVMTYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINI
YRMFCSTAGSLCVSVLVLPLVSLFGGEQSAWIITFAIFGIVATFMFFLTFKTTKERVTAVNEEQSQNISFKDGMKALIQN
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNDKKLVAGLSIAQNIPTLIVMLTIAMTLIKKYGKRNTAILGSIIFILG
SLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAF
SNYNGSSKIQTGTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPSIISDLEKRKI
>Mature_458_residues
MNITNYKINNNTNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIISTLMLVVRILAGFMDIASGIVV
DKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGGSGKLAYVVMTYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINI
YRMFCSTAGSLCVSVLVLPLVSLFGGEQSAWIITFAIFGIVATFMFFLTFKTTKERVTAVNEEQSQNISFKDGMKALIQN
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNDKKLVAGLSIAQNIPTLIVMLTIAMTLIKKYGKRNTAILGSIIFILG
SLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAF
SNYNGSSKIQTGTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPSIISDLEKRKI

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Homo sapiens, GI122937339, Length=461, Percent_Identity=19.5227765726681, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1786466, Length=452, Percent_Identity=33.6283185840708, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI87082306, Length=439, Percent_Identity=31.4350797266515, Blast_Score=232, Evalue=4e-62,
Organism=Escherichia coli, GI1787902, Length=443, Percent_Identity=30.2483069977427, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI145693206, Length=456, Percent_Identity=27.6315789473684, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI48994989, Length=453, Percent_Identity=26.0485651214128, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790561, Length=439, Percent_Identity=28.0182232346241, Blast_Score=149, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50721; Mature: 50721

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITNYKINNNTNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIIST
CCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLVVRILAGFMDIASGIVVDKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGGSGKL
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHH
AYVVMTYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINIYRMFCSTAGSLCVSVLVLPL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLFGGEQSAWIITFAIFGIVATFMFFLTFKTTKERVTAVNEEQSQNISFKDGMKALIQN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCC
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNDKKLVAGLSIAQNIPTLIVMLTIAMTL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKYGKRNTAILGSIIFILGSLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHH
EYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAFSNYNGSSKIQTGTAINAINI
HCCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHH
LFIWLPMILSGVQIILLKFYKLDKIYPSIISDLEKRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNITNYKINNNTNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIIST
CCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLVVRILAGFMDIASGIVVDKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGGSGKL
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHH
AYVVMTYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINIYRMFCSTAGSLCVSVLVLPL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLFGGEQSAWIITFAIFGIVATFMFFLTFKTTKERVTAVNEEQSQNISFKDGMKALIQN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCC
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNDKKLVAGLSIAQNIPTLIVMLTIAMTL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKYGKRNTAILGSIIFILGSLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHH
EYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAFSNYNGSSKIQTGTAINAINI
HCCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHH
LFIWLPMILSGVQIILLKFYKLDKIYPSIISDLEKRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]