| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is spoVG
Identifier: 170756872
GI number: 170756872
Start: 3863858
End: 3864145
Strand: Reverse
Name: spoVG
Synonym: CLD_0937
Alternate gene names: 170756872
Gene position: 3864145-3863858 (Counterclockwise)
Preceding gene: 170755829
Following gene: 170754276
Centisome position: 97.62
GC content: 32.64
Gene sequence:
>288_bases ATGCAAATTACAGATGTACGTGTTAGAAAAATTGCGGCAGAAGGAAAAATGAAGGCTATAGTTTCAGTAACCTTTGATAA TGAGTTTGTAGTTCACGATATAAAGGTTATAGAGGGCCAAAATGGACTTTTTATTGCTATGCCTAGTAGAAAAACACCAG ATGGTGAATATAAGGATATAGCACATCCAATCAATACTGAAACTAGAGAGAAAATTCAAAAATCTATAATCGAAGAATAC GAGAGAGCAAAAATGGAAGAAGAATCTTCTGAAAAAGTTCAAGAATAA
Upstream 100 bases:
>100_bases TAATTTTCAAAAAATTTAATATTTTTTTGAAAATACAGAAGGAAAAACATAAAATTTAGAGAATATGTATGTATATACAT AGCATCTTGGAGGTGGAATT
Downstream 100 bases:
>100_bases AATATCTAAAAAGGAGCTTATAAGCTCCTTTTTTATTTTTGAACTATTCTAAAAATATGGTAATAGGTTGAAAATAATTT TTATATAAAATATAATATTA
Product: regulatory protein SpoVG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MQITDVRVRKIAAEGKMKAIVSVTFDNEFVVHDIKVIEGQNGLFIAMPSRKTPDGEYKDIAHPINTETREKIQKSIIEEY ERAKMEEESSEKVQE
Sequences:
>Translated_95_residues MQITDVRVRKIAAEGKMKAIVSVTFDNEFVVHDIKVIEGQNGLFIAMPSRKTPDGEYKDIAHPINTETREKIQKSIIEEY ERAKMEEESSEKVQE >Mature_95_residues MQITDVRVRKIAAEGKMKAIVSVTFDNEFVVHDIKVIEGQNGLFIAMPSRKTPDGEYKDIAHPINTETREKIQKSIIEEY ERAKMEEESSEKVQE
Specific function: Could be involved in septation
COG id: COG2088
COG function: function code M; Uncharacterized protein, involved in the regulation of septum location
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spoVG family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SP5G_CLOB1 (A7FPK3)
Other databases:
- EMBL: CP000726 - RefSeq: YP_001385861.1 - ProteinModelPortal: A7FPK3 - SMR: A7FPK3 - STRING: A7FPK3 - GeneID: 5397666 - GenomeReviews: CP000726_GR - KEGG: cba:CLB_3627 - eggNOG: COG2088 - HOGENOM: HBG288253 - OMA: QITDVRI - ProtClustDB: PRK13259 - BioCyc: CBOT441770:CLB_3627-MONOMER - HAMAP: MF_00819 - InterPro: IPR007170
Pfam domain/function: PF04026 SpoVG
EC number: NA
Molecular weight: Translated: 10924; Mature: 10924
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQITDVRVRKIAAEGKMKAIVSVTFDNEFVVHDIKVIEGQNGLFIAMPSRKTPDGEYKDI CCCCHHHHHHHHHCCCEEEEEEEEECCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCC AHPINTETREKIQKSIIEEYERAKMEEESSEKVQE CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCC >Mature Secondary Structure MQITDVRVRKIAAEGKMKAIVSVTFDNEFVVHDIKVIEGQNGLFIAMPSRKTPDGEYKDI CCCCHHHHHHHHHCCCEEEEEEEEECCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCC AHPINTETREKIQKSIIEEYERAKMEEESSEKVQE CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA