| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is purR
Identifier: 170755829
GI number: 170755829
Start: 3864248
End: 3865063
Strand: Reverse
Name: purR
Synonym: CLD_0936
Alternate gene names: 170755829
Gene position: 3865063-3864248 (Counterclockwise)
Preceding gene: 170757749
Following gene: 170756872
Centisome position: 97.65
GC content: 27.08
Gene sequence:
>816_bases ATGGATAAATTTACAAGAAATCAACGAATAGCTATTATTATGAAAATATTAATAGAGAATCCAAATAAAATTATAAATTT AAATAATTTTACAGAACTTTTTAATGCTGCAAAATCTACTATAAGTGAAGATTTATTTGTAGTAAAGGATATATTAAACA AAATGAATGTGGGAAAAGTAGAAACCATATCAGGGGCAGCTGGAGGAGTAAAATTTATAAATGGTATATCAGAAGATAAA AGTAAAGATTTTGCTGAGAAACTATGTATAAATTTAAGCAAAAAGGACAGAATAATACCAGGAAACTTTTTATATGTTAC AGATATAATGTGCAATCCTCAAATAATAAAACAAGCAGCTAATATACTTTCATCTTTTTTTTCAGGAGGACATATAGATT ATGTTATTACTGTTGAAACAAAGGGAATACCTTTGGCCTATGAAGTAGCTAATCTATTAGGAGTTCAACTTGTTGTTGTT CGTCGGGAAAATAAGCTTACAGAGGGTTCAACTTTAAGTATAAATTATGTTTCAGGCTCCAGTGGAAGAGTACAAAATAT GTATGTATCAAAAGATGCAATAAAAAGGAATAGTAAATGCATTTTTATTGATGATTTTATGAAAGCTGGAGGAACAGCAC TTGGAATAATTAATTTACTTAAGGAGTTTGAAAGTGAATTATTGGGAATTGGGGTATTGATAGATAATACAGATATAACT AAAAAATTAGTAAATGATTATTTTTCTATAATAGATTTTAATGGGTTTGATGATAATGGAAATATAGTAGTTAAGCCATC TAAATTATTCAGATAA
Upstream 100 bases:
>100_bases TTAAGCTGTTGATATTGTTACATATTTATCTTAAAATGAGAATAATAAGAATAATAAATTAAAAATAATTCGTAAAATAA CATTTTAGATAGGTGATAAT
Downstream 100 bases:
>100_bases TGTAATTTTCAAAAAATTTAATATTTTTTTGAAAATACAGAAGGAAAAACATAAAATTTAGAGAATATGTATGTATATAC ATAGCATCTTGGAGGTGGAA
Product: pur operon repressor
Products: AMP; Diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MDKFTRNQRIAIIMKILIENPNKIINLNNFTELFNAAKSTISEDLFVVKDILNKMNVGKVETISGAAGGVKFINGISEDK SKDFAEKLCINLSKKDRIIPGNFLYVTDIMCNPQIIKQAANILSSFFSGGHIDYVITVETKGIPLAYEVANLLGVQLVVV RRENKLTEGSTLSINYVSGSSGRVQNMYVSKDAIKRNSKCIFIDDFMKAGGTALGIINLLKEFESELLGIGVLIDNTDIT KKLVNDYFSIIDFNGFDDNGNIVVKPSKLFR
Sequences:
>Translated_271_residues MDKFTRNQRIAIIMKILIENPNKIINLNNFTELFNAAKSTISEDLFVVKDILNKMNVGKVETISGAAGGVKFINGISEDK SKDFAEKLCINLSKKDRIIPGNFLYVTDIMCNPQIIKQAANILSSFFSGGHIDYVITVETKGIPLAYEVANLLGVQLVVV RRENKLTEGSTLSINYVSGSSGRVQNMYVSKDAIKRNSKCIFIDDFMKAGGTALGIINLLKEFESELLGIGVLIDNTDIT KKLVNDYFSIIDFNGFDDNGNIVVKPSKLFR >Mature_271_residues MDKFTRNQRIAIIMKILIENPNKIINLNNFTELFNAAKSTISEDLFVVKDILNKMNVGKVETISGAAGGVKFINGISEDK SKDFAEKLCINLSKKDRIIPGNFLYVTDIMCNPQIIKQAANILSSFFSGGHIDYVITVETKGIPLAYEVANLLGVQLVVV RRENKLTEGSTLSINYVSGSSGRVQNMYVSKDAIKRNSKCIFIDDFMKAGGTALGIINLLKEFESELLGIGVLIDNTDIT KKLVNDYFSIIDFNGFDDNGNIVVKPSKLFR
Specific function: Controls the transcription of the pur operon for purine biosynthetic genes, binds to the control region of the operon. DNA binding is inhibited by 5-phosphoribosyl 1-pyrophosphate [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR015265 - InterPro: IPR010078 - InterPro: IPR011991 - ProDom: PD029816 [H]
Pfam domain/function: PF00156 Pribosyltran; PF09182 PuR_N [H]
EC number: 2.4.2.7 [C]
Molecular weight: Translated: 30019; Mature: 30019
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKFTRNQRIAIIMKILIENPNKIINLNNFTELFNAAKSTISEDLFVVKDILNKMNVGKV CCCCCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ETISGAAGGVKFINGISEDKSKDFAEKLCINLSKKDRIIPGNFLYVTDIMCNPQIIKQAA EEECCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHH NILSSFFSGGHIDYVITVETKGIPLAYEVANLLGVQLVVVRRENKLTEGSTLSINYVSGS HHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCEEEEEEECCCCCCCCCEEEEEEEECC SGRVQNMYVSKDAIKRNSKCIFIDDFMKAGGTALGIINLLKEFESELLGIGVLIDNTDIT CCCEEEEEECHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEECCHHH KKLVNDYFSIIDFNGFDDNGNIVVKPSKLFR HHHHHHHHHHEECCCCCCCCCEEECCHHHCC >Mature Secondary Structure MDKFTRNQRIAIIMKILIENPNKIINLNNFTELFNAAKSTISEDLFVVKDILNKMNVGKV CCCCCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ETISGAAGGVKFINGISEDKSKDFAEKLCINLSKKDRIIPGNFLYVTDIMCNPQIIKQAA EEECCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHH NILSSFFSGGHIDYVITVETKGIPLAYEVANLLGVQLVVVRRENKLTEGSTLSINYVSGS HHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCEEEEEEECCCCCCCCCEEEEEEEECC SGRVQNMYVSKDAIKRNSKCIFIDDFMKAGGTALGIINLLKEFESELLGIGVLIDNTDIT CCCEEEEEECHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEECCHHH KKLVNDYFSIIDFNGFDDNGNIVVKPSKLFR HHHHHHHHHHEECCCCCCCCCEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): 560 [C]
Specific activity: 14
Km value (mM): 0.125 {5-phospho-alpha-D-ribose} 0.02 {adenine}} [C]
Substrates: Adenine; 5-Phospho-alpha-D-ribose 1-diphosphate [C]
Specific reaction: Adenine + 5-Phospho-alpha-D-ribose 1-diphosphate --> AMP + Diphosphate [C]
General reaction: Pentosyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 7638212 [H]