| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756822
Identifier: 170756822
GI number: 170756822
Start: 2192202
End: 2193437
Strand: Reverse
Name: 170756822
Synonym: CLD_2584
Alternate gene names: NA
Gene position: 2193437-2192202 (Counterclockwise)
Preceding gene: 170756156
Following gene: 170755302
Centisome position: 55.41
GC content: 25.81
Gene sequence:
>1236_bases ATGAAAATAAATTTGTCAGTAGAGGTCAAGGATTTTAAGCGTCAAGTTAAATATCTAAGAGAAAAATTGAATAAATGCCA AAGAGATGGAATTTTAGATGATGATTTTAAAGAACAATTAAATAAACTTTTAAAAATAGAAGAAGAGTTATTGACTGATT TAATTCCCTATTATAGAGTTTATGCAAATAATATCAAAAAGACTTCAATACTAATAAATCCGATAAAACAATTGGGAGCT TTTAGTTTTGATAGTTTCTTACAAACTACATTGAGGATTAATAAAAACCTTTTTATTACAAGTAGTATAGATAGAAAAAT TCAATTCTTTTATATAGATATTGTAGATGATTTTTCTAATTATAATCAAATTGAAGTGGAGTGGAGTCTTCCTATTAAAG AAATAAAAGAGACGATTTCCTTTATATATAAATTGAATGACAAAGAAATTTTGCTTTTAGGGGTCAGAGGTGGATGCTAT CTTATTTCAAGCAATAATTTTGATAAGCCGCCTAATGTTAATGAAGAGATTAAAGTTAAAAGGATTCAAATAAATTATGA TTTTAATGGATTTGGAAGATGTTTAGCAATTAGTGATGGTTTATTTGTAGTGGAAAATGGAGATGAAAAGTTAAATTTAT TTGAAATAATAAAAGAAAATGATGAATATGGTTTGGTTTTTCATAAAGATATATATTGCACTATTCCAAATTGGACTGTA CTAGAAAAAATAAATGACGATTATTTTATAGTTGGAACAAAGATGGGAAAACTATATTTTATTAAATATGAGAACAAACA ATTTACTATTACAGAAAAAATTAATTTTTTAGATGATGAAATAAGGCAAATTAGATGTTTAGAAGATGAAAATGGTAACA AGAAATCACTTATAGTGATAGGCAATAAAGGACAGATTAAGATATTTTCTTTATATGAAGATTCAAAGAATGTAAATATA GAATTGAATGATTTGAAAGGCAATTTGTTTGATGTCCAATCTAAAAAAGGCACAGCTGTAGTTTTAAGTGAAGATGGAAT CATATATTTACTTGAAGAGAATTTTGGAAATTGGTATCTAAATGAAGATGCAACGATTAAAGACATCTTTTTTACTAATG TCCTTGAATTGGATGTTTCAAAATATCTACTCATGGATATAGAAGGTAAATTAAATCTGTTATCCATTGATCGAATTGAT ACACCAAAAGACTTGTGGAATCTACCGCTGTATTAA
Upstream 100 bases:
>100_bases GAATTGATGCGATAGAGTATCAAAAACTAGACCAACAATTATTTCATTTAGAGCATTCAAAAGATCTACTTGAATACTTA GAAGATAATGGAGAAGAAAA
Downstream 100 bases:
>100_bases TAGGAGAGATGAGTATGTTTGACTTTGATGAACAAACACTAATTCAAGAATCTAAAAAACATTGCGAAGAATTTCTACAA AAAGAACAACGCTCATTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MKINLSVEVKDFKRQVKYLREKLNKCQRDGILDDDFKEQLNKLLKIEEELLTDLIPYYRVYANNIKKTSILINPIKQLGA FSFDSFLQTTLRINKNLFITSSIDRKIQFFYIDIVDDFSNYNQIEVEWSLPIKEIKETISFIYKLNDKEILLLGVRGGCY LISSNNFDKPPNVNEEIKVKRIQINYDFNGFGRCLAISDGLFVVENGDEKLNLFEIIKENDEYGLVFHKDIYCTIPNWTV LEKINDDYFIVGTKMGKLYFIKYENKQFTITEKINFLDDEIRQIRCLEDENGNKKSLIVIGNKGQIKIFSLYEDSKNVNI ELNDLKGNLFDVQSKKGTAVVLSEDGIIYLLEENFGNWYLNEDATIKDIFFTNVLELDVSKYLLMDIEGKLNLLSIDRID TPKDLWNLPLY
Sequences:
>Translated_411_residues MKINLSVEVKDFKRQVKYLREKLNKCQRDGILDDDFKEQLNKLLKIEEELLTDLIPYYRVYANNIKKTSILINPIKQLGA FSFDSFLQTTLRINKNLFITSSIDRKIQFFYIDIVDDFSNYNQIEVEWSLPIKEIKETISFIYKLNDKEILLLGVRGGCY LISSNNFDKPPNVNEEIKVKRIQINYDFNGFGRCLAISDGLFVVENGDEKLNLFEIIKENDEYGLVFHKDIYCTIPNWTV LEKINDDYFIVGTKMGKLYFIKYENKQFTITEKINFLDDEIRQIRCLEDENGNKKSLIVIGNKGQIKIFSLYEDSKNVNI ELNDLKGNLFDVQSKKGTAVVLSEDGIIYLLEENFGNWYLNEDATIKDIFFTNVLELDVSKYLLMDIEGKLNLLSIDRID TPKDLWNLPLY >Mature_411_residues MKINLSVEVKDFKRQVKYLREKLNKCQRDGILDDDFKEQLNKLLKIEEELLTDLIPYYRVYANNIKKTSILINPIKQLGA FSFDSFLQTTLRINKNLFITSSIDRKIQFFYIDIVDDFSNYNQIEVEWSLPIKEIKETISFIYKLNDKEILLLGVRGGCY LISSNNFDKPPNVNEEIKVKRIQINYDFNGFGRCLAISDGLFVVENGDEKLNLFEIIKENDEYGLVFHKDIYCTIPNWTV LEKINDDYFIVGTKMGKLYFIKYENKQFTITEKINFLDDEIRQIRCLEDENGNKKSLIVIGNKGQIKIFSLYEDSKNVNI ELNDLKGNLFDVQSKKGTAVVLSEDGIIYLLEENFGNWYLNEDATIKDIFFTNVLELDVSKYLLMDIEGKLNLLSIDRID TPKDLWNLPLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48154; Mature: 48154
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINLSVEVKDFKRQVKYLREKLNKCQRDGILDDDFKEQLNKLLKIEEELLTDLIPYYRV CEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YANNIKKTSILINPIKQLGAFSFDSFLQTTLRINKNLFITSSIDRKIQFFYIDIVDDFSN HHCCCEEEEEEEECHHHHCCCCHHHHHHHHHEECCCEEEEECCCCEEEEEEEEEEECCCC YNQIEVEWSLPIKEIKETISFIYKLNDKEILLLGVRGGCYLISSNNFDKPPNVNEEIKVK CCEEEEEECCCHHHHHHHHHEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEE RIQINYDFNGFGRCLAISDGLFVVENGDEKLNLFEIIKENDEYGLVFHKDIYCTIPNWTV EEEEEECCCCCEEEEEEECCEEEEECCCCCEEHEEEEECCCCEEEEEEEEEEEECCCCEE LEKINDDYFIVGTKMGKLYFIKYENKQFTITEKINFLDDEIRQIRCLEDENGNKKSLIVI EEECCCCEEEEEEECCEEEEEEECCCEEEEEEECCHHHHHHHEEEEEECCCCCEEEEEEE GNKGQIKIFSLYEDSKNVNIELNDLKGNLFDVQSKKGTAVVLSEDGIIYLLEENFGNWYL ECCCCEEEEEEEECCCCEEEEEEECCCCEEEEECCCCCEEEEECCCEEEEEECCCCCEEE NEDATIKDIFFTNVLELDVSKYLLMDIEGKLNLLSIDRIDTPKDLWNLPLY CCCCEEEEEHHHHEEEECCCEEEEEEECCCEEEEEECCCCCCHHHHCCCCC >Mature Secondary Structure MKINLSVEVKDFKRQVKYLREKLNKCQRDGILDDDFKEQLNKLLKIEEELLTDLIPYYRV CEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YANNIKKTSILINPIKQLGAFSFDSFLQTTLRINKNLFITSSIDRKIQFFYIDIVDDFSN HHCCCEEEEEEEECHHHHCCCCHHHHHHHHHEECCCEEEEECCCCEEEEEEEEEEECCCC YNQIEVEWSLPIKEIKETISFIYKLNDKEILLLGVRGGCYLISSNNFDKPPNVNEEIKVK CCEEEEEECCCHHHHHHHHHEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEE RIQINYDFNGFGRCLAISDGLFVVENGDEKLNLFEIIKENDEYGLVFHKDIYCTIPNWTV EEEEEECCCCCEEEEEEECCEEEEECCCCCEEHEEEEECCCCEEEEEEEEEEEECCCCEE LEKINDDYFIVGTKMGKLYFIKYENKQFTITEKINFLDDEIRQIRCLEDENGNKKSLIVI EEECCCCEEEEEEECCEEEEEEECCCEEEEEEECCHHHHHHHEEEEEECCCCCEEEEEEE GNKGQIKIFSLYEDSKNVNIELNDLKGNLFDVQSKKGTAVVLSEDGIIYLLEENFGNWYL ECCCCEEEEEEEECCCCEEEEEEECCCCEEEEECCCCCEEEEECCCEEEEEECCCCCEEE NEDATIKDIFFTNVLELDVSKYLLMDIEGKLNLLSIDRIDTPKDLWNLPLY CCCCEEEEEHHHHEEEECCCEEEEEEECCCEEEEEECCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA