| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755302
Identifier: 170755302
GI number: 170755302
Start: 2190244
End: 2192187
Strand: Reverse
Name: 170755302
Synonym: CLD_2585
Alternate gene names: NA
Gene position: 2192187-2190244 (Counterclockwise)
Preceding gene: 170756822
Following gene: 170754826
Centisome position: 55.38
GC content: 30.76
Gene sequence:
>1944_bases ATGTTTGACTTTGATGAACAAACACTAATTCAAGAATCTAAAAAACATTGCGAAGAATTTCTACAAAAAGAACAACGCTC ATTAGCCACATTTACAGGAGATTCTAGTTTGATGTATATTCCTGATTCAAAACTACAAAGATTTATATTAGACTCTTCCA AAGGGGTTCTGTACCTACCCTTGGAAAGTTTTCTAGATAGAAAATTGGATGATACTCAAATCATGTGGCATATCTATTAT GAATTAGCCTTATATCCTGATTGGAAAAAGCAAACTAAAAAATATCTAAATAGAAAAAAAGATTGGCAGAAAGAAATTGA TCACATGACAAGCTACATTATTACTAGGATAAAAAAGGAAGGTCTGGAAAATGACCCCGCATACCAACCTAAAGTTATTT CTAATTATGTGAGAAAAGAAATTTTAGATTTGTTACATCTATTGGATAAACAGACATCGTTCCTAAGAGTTTTACAGATG TGTCCTATATATAGGGATGAAGAAAATTTTAAAAAAATTGTTTCATATATGAAAAAAACAGGTAAGATCATTGAGTCAAT TTCTCAAATGCCTAGGCATAGAGCCTTTGCAAATAGCTTTTTTATTATTGAATTATATAAAATAGAGCCTAAAATCGAAG AGTGTGCTCAAAATCCATTTGATAGAAAAATTTTTAATCAGCCTTTTTTTGATTTTATTCATTATCAATTAGTTAAACAG ATAAATAACGATCAGGGAATTATAGAGAGAGATCCATTCATTCGTTCTTTCATCTTTCCAACTTTTCAGCAATTGTGGAA ACAAGAAATTGATGAAATGATGCTTTATAAATCAAAAGGACAGAAAGAAGAGCAAGTTAAAGGAAGTGAAAATCTTTTCG AACAGTCAAAAGCAGATGAGATACCAGATTCACTAGAATCTACTCAGGAAGAAGTAGAAAAGATTTTAGAAGAAATGCTA GATCAAGAAGACCAAATAAGTACGAGTATACAAAATGCCATGCAAGGTAAAGTAGATTTAGAGGCTTATGGGATTAGCCA ATCAGATCAACAATTATTTCAATTTTATTCAAATAAAATGAAATTGGAGAGGGAGCAAATGCGTCAATTTTGGAAAAAGT TGATAGGAGATGCAAAGAAAGAAGTGGGTGTAAAAAAAGATGGTCAAGTAAAGGGTAAACTAGATGTAGATAGCTTTATT AATTTTTATCCGGATTTTGTAGAAGCTGAAAAAAAGGGGAATTATAAAAATATTCCAATTTTCAATAGATACTTACTCGA AACTCAGGCAGACATATTGCCTGAAAGAATAGAGATTTCTTTTGTTATAGATAATTCGGGATCAATGAGTGAGTCAAAAA TTGAGGCGTCAAGAAAAGCTTTGGCAGTGACTTTGTTGTCTATAGATGATTTCAATAAATATTTAAAAAGTAATGCAGAA CAATTAAATCAAAAAGTAGAAGTTTTAAGCGAAACTTGGTTTTTTGGCAGTAAGTATTATAATGTTAAAGAGTTTAACGA TAAAAACGTGAAGGAAAAAGAAAAAAGCGATATAATTCGATCAATCGTAAAGCTAGATGCAACAGATGGAGCAACTGATG ATGCAAGTTGCCTTAGAGAAATATCCAATAGAATGACATCCATACAGGAAAGTGAACTCAAAAAAGGAAAACAAATAAAG ATAGTCTTTGAAATTACAGATGGTGCATCAAGTTTTCCAGGATCAGCAAAAGAAGCTGTACAAGAATTATTATCTAAAAA TGTTGAAGTTTATGCATTCCAGATAGGAAAAAATAGCGAAACAAATGAAAAAATCTTTAACTTCGTATGGAATGAAGGAT ACAAACAACCACACGGAGTAATGATTGGTGAACAAGTAGAAAAACTACCAAAAGAATTACTAAAAGCAGTAGGCAAAAAT ATGCAGTCTATCTTTAATAATTAG
Upstream 100 bases:
>100_bases TCATGGATATAGAAGGTAAATTAAATCTGTTATCCATTGATCGAATTGATACACCAAAAGACTTGTGGAATCTACCGCTG TATTAATAGGAGAGATGAGT
Downstream 100 bases:
>100_bases TTGGGTAAGCGTAAAATTAAGCCTTCATTTTAATTCATTAATTTCTTTTAATTCACATAACAATAGTATAAAGTATTTAA AATAACAATTAGGGGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 647; Mature: 647
Protein sequence:
>647_residues MFDFDEQTLIQESKKHCEEFLQKEQRSLATFTGDSSLMYIPDSKLQRFILDSSKGVLYLPLESFLDRKLDDTQIMWHIYY ELALYPDWKKQTKKYLNRKKDWQKEIDHMTSYIITRIKKEGLENDPAYQPKVISNYVRKEILDLLHLLDKQTSFLRVLQM CPIYRDEENFKKIVSYMKKTGKIIESISQMPRHRAFANSFFIIELYKIEPKIEECAQNPFDRKIFNQPFFDFIHYQLVKQ INNDQGIIERDPFIRSFIFPTFQQLWKQEIDEMMLYKSKGQKEEQVKGSENLFEQSKADEIPDSLESTQEEVEKILEEML DQEDQISTSIQNAMQGKVDLEAYGISQSDQQLFQFYSNKMKLEREQMRQFWKKLIGDAKKEVGVKKDGQVKGKLDVDSFI NFYPDFVEAEKKGNYKNIPIFNRYLLETQADILPERIEISFVIDNSGSMSESKIEASRKALAVTLLSIDDFNKYLKSNAE QLNQKVEVLSETWFFGSKYYNVKEFNDKNVKEKEKSDIIRSIVKLDATDGATDDASCLREISNRMTSIQESELKKGKQIK IVFEITDGASSFPGSAKEAVQELLSKNVEVYAFQIGKNSETNEKIFNFVWNEGYKQPHGVMIGEQVEKLPKELLKAVGKN MQSIFNN
Sequences:
>Translated_647_residues MFDFDEQTLIQESKKHCEEFLQKEQRSLATFTGDSSLMYIPDSKLQRFILDSSKGVLYLPLESFLDRKLDDTQIMWHIYY ELALYPDWKKQTKKYLNRKKDWQKEIDHMTSYIITRIKKEGLENDPAYQPKVISNYVRKEILDLLHLLDKQTSFLRVLQM CPIYRDEENFKKIVSYMKKTGKIIESISQMPRHRAFANSFFIIELYKIEPKIEECAQNPFDRKIFNQPFFDFIHYQLVKQ INNDQGIIERDPFIRSFIFPTFQQLWKQEIDEMMLYKSKGQKEEQVKGSENLFEQSKADEIPDSLESTQEEVEKILEEML DQEDQISTSIQNAMQGKVDLEAYGISQSDQQLFQFYSNKMKLEREQMRQFWKKLIGDAKKEVGVKKDGQVKGKLDVDSFI NFYPDFVEAEKKGNYKNIPIFNRYLLETQADILPERIEISFVIDNSGSMSESKIEASRKALAVTLLSIDDFNKYLKSNAE QLNQKVEVLSETWFFGSKYYNVKEFNDKNVKEKEKSDIIRSIVKLDATDGATDDASCLREISNRMTSIQESELKKGKQIK IVFEITDGASSFPGSAKEAVQELLSKNVEVYAFQIGKNSETNEKIFNFVWNEGYKQPHGVMIGEQVEKLPKELLKAVGKN MQSIFNN >Mature_647_residues MFDFDEQTLIQESKKHCEEFLQKEQRSLATFTGDSSLMYIPDSKLQRFILDSSKGVLYLPLESFLDRKLDDTQIMWHIYY ELALYPDWKKQTKKYLNRKKDWQKEIDHMTSYIITRIKKEGLENDPAYQPKVISNYVRKEILDLLHLLDKQTSFLRVLQM CPIYRDEENFKKIVSYMKKTGKIIESISQMPRHRAFANSFFIIELYKIEPKIEECAQNPFDRKIFNQPFFDFIHYQLVKQ INNDQGIIERDPFIRSFIFPTFQQLWKQEIDEMMLYKSKGQKEEQVKGSENLFEQSKADEIPDSLESTQEEVEKILEEML DQEDQISTSIQNAMQGKVDLEAYGISQSDQQLFQFYSNKMKLEREQMRQFWKKLIGDAKKEVGVKKDGQVKGKLDVDSFI NFYPDFVEAEKKGNYKNIPIFNRYLLETQADILPERIEISFVIDNSGSMSESKIEASRKALAVTLLSIDDFNKYLKSNAE QLNQKVEVLSETWFFGSKYYNVKEFNDKNVKEKEKSDIIRSIVKLDATDGATDDASCLREISNRMTSIQESELKKGKQIK IVFEITDGASSFPGSAKEAVQELLSKNVEVYAFQIGKNSETNEKIFNFVWNEGYKQPHGVMIGEQVEKLPKELLKAVGKN MQSIFNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 75852; Mature: 75852
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDFDEQTLIQESKKHCEEFLQKEQRSLATFTGDSSLMYIPDSKLQRFILDSSKGVLYLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCCCEEEEE LESFLDRKLDDTQIMWHIYYELALYPDWKKQTKKYLNRKKDWQKEIDHMTSYIITRIKKE HHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLENDPAYQPKVISNYVRKEILDLLHLLDKQTSFLRVLQMCPIYRDEENFKKIVSYMKKT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GKIIESISQMPRHRAFANSFFIIELYKIEPKIEECAQNPFDRKIFNQPFFDFIHYQLVKQ HHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHH INNDQGIIERDPFIRSFIFPTFQQLWKQEIDEMMLYKSKGQKEEQVKGSENLFEQSKADE HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHC IPDSLESTQEEVEKILEEMLDQEDQISTSIQNAMQGKVDLEAYGISQSDQQLFQFYSNKM CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH KLEREQMRQFWKKLIGDAKKEVGVKKDGQVKGKLDVDSFINFYPDFVEAEKKGNYKNIPI HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHCCCCCCCCH FNRYLLETQADILPERIEISFVIDNSGSMSESKIEASRKALAVTLLSIDDFNKYLKSNAE HHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLNQKVEVLSETWFFGSKYYNVKEFNDKNVKEKEKSDIIRSIVKLDATDGATDDASCLRE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ISNRMTSIQESELKKGKQIKIVFEITDGASSFPGSAKEAVQELLSKNVEVYAFQIGKNSE HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCC TNEKIFNFVWNEGYKQPHGVMIGEQVEKLPKELLKAVGKNMQSIFNN HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFDFDEQTLIQESKKHCEEFLQKEQRSLATFTGDSSLMYIPDSKLQRFILDSSKGVLYLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCCCEEEEE LESFLDRKLDDTQIMWHIYYELALYPDWKKQTKKYLNRKKDWQKEIDHMTSYIITRIKKE HHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLENDPAYQPKVISNYVRKEILDLLHLLDKQTSFLRVLQMCPIYRDEENFKKIVSYMKKT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GKIIESISQMPRHRAFANSFFIIELYKIEPKIEECAQNPFDRKIFNQPFFDFIHYQLVKQ HHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHH INNDQGIIERDPFIRSFIFPTFQQLWKQEIDEMMLYKSKGQKEEQVKGSENLFEQSKADE HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHC IPDSLESTQEEVEKILEEMLDQEDQISTSIQNAMQGKVDLEAYGISQSDQQLFQFYSNKM CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH KLEREQMRQFWKKLIGDAKKEVGVKKDGQVKGKLDVDSFINFYPDFVEAEKKGNYKNIPI HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHCCCCCCCCH FNRYLLETQADILPERIEISFVIDNSGSMSESKIEASRKALAVTLLSIDDFNKYLKSNAE HHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLNQKVEVLSETWFFGSKYYNVKEFNDKNVKEKEKSDIIRSIVKLDATDGATDDASCLRE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ISNRMTSIQESELKKGKQIKIVFEITDGASSFPGSAKEAVQELLSKNVEVYAFQIGKNSE HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCC TNEKIFNFVWNEGYKQPHGVMIGEQVEKLPKELLKAVGKNMQSIFNN HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]