Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is yrrI [H]

Identifier: 170756779

GI number: 170756779

Start: 2735707

End: 2736735

Strand: Reverse

Name: yrrI [H]

Synonym: CLD_2000

Alternate gene names: 170756779

Gene position: 2736735-2735707 (Counterclockwise)

Preceding gene: 170757180

Following gene: 170755913

Centisome position: 69.14

GC content: 22.45

Gene sequence:

>1029_bases
ATGAGAAAATATTACAAAAATTTGTACTGTAAACTATTATTTTTTATATTAGTATTCCTAGTATTTTTTATTATACTTAT
AAAAAATACCATAGTAAGAGATATACTTTCCTTATTTTTTATATCTTTTGTTATATATTATATACTAAAACCTATACATA
CATTTTTAAAACATAAGGGTATAAATGAGAAATTTTCCGCATTACTTTTAGTTGTTACATTAATAATGATCATAGGAGTC
TTTATTATTTCTATAATACCTGCCATAATAAAAGAAGGATACAATATAACAAGTTCTGTAGGATATATTCAAAAATATAT
AGATTATATATATAATAAAATAAATTTATTGAATAATAATAAAATTTTAGGAGGAATTTTAAATAAAGTAAATGGAAAAA
TTGAAAATTATACAGTATCAATTGGAGAAAATATTTTAAATAAATTTGTAGGTTTTGGAGAAAATATATTAGATTATGCA
GTTATTCCTATAATAGTATATTATTTTTTAGCCGCAGGGGATAAAATAATACAAAAATTTTTTATGATTTTTCCTGTTAA
GATAAGAGGGATGGTAAAAAACGTACTTGAGGATATAGATAAAATTTTAGTAAGATATATTATAAGTCAAATAATATTAT
GTTTAATAATAACAATACTTACTTTTTTAGTTTTAATAGGCTTAGGTATAAAATTACCTATATTATTATCATTGATAAAT
GGATTTTTTAATATAATACCTTATTTTGGGCCGGTTATAGGATCCTTGCCAGCTATATTAATAGCCTTTACAAAATCACC
TAAAACAGCTTTGTGGGCTTTGATTTTATTATACTTTATACAACAAATAGAAGGTGATATACTGTCTCCTAAAATTACAG
GAGATAGTGTAGATATGCATCCCTTAACAGTTATATTACTTCTTTTAGTAGGAGGGAAAATATATGGCTTTGTGGGGATG
GTTTTAGCTATACCTATAGGAGTTATAATGAAAATTATATATGAAGATTTAAACTATTATTTGTTTTAA

Upstream 100 bases:

>100_bases
ATTAGGAGAAAGAAATCTACTTTATTTTAATTATAGAAGTAGAAATTTAGATTTTAAAATTATGGTTAAAAACAAAATGA
ATACATAGGAGTAAGAGATC

Downstream 100 bases:

>100_bases
ATGAATCATAGAATAAACAGAGTTCTTGGCTTTAGAGGAGGTTTTTACTCCCTCTGAAGCTTAGGAAATGGTTATCCAGG
GACGTAGCCGCTCTTTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRKYYKNLYCKLLFFILVFLVFFIILIKNTIVRDILSLFFISFVIYYILKPIHTFLKHKGINEKFSALLLVVTLIMIIGV
FIISIIPAIIKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIGENILNKFVGFGENILDYA
VIPIIVYYFLAAGDKIIQKFFMIFPVKIRGMVKNVLEDIDKILVRYIISQIILCLIITILTFLVLIGLGIKLPILLSLIN
GFFNIIPYFGPVIGSLPAILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLVGGKIYGFVGM
VLAIPIGVIMKIIYEDLNYYLF

Sequences:

>Translated_342_residues
MRKYYKNLYCKLLFFILVFLVFFIILIKNTIVRDILSLFFISFVIYYILKPIHTFLKHKGINEKFSALLLVVTLIMIIGV
FIISIIPAIIKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIGENILNKFVGFGENILDYA
VIPIIVYYFLAAGDKIIQKFFMIFPVKIRGMVKNVLEDIDKILVRYIISQIILCLIITILTFLVLIGLGIKLPILLSLIN
GFFNIIPYFGPVIGSLPAILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLVGGKIYGFVGM
VLAIPIGVIMKIIYEDLNYYLF
>Mature_342_residues
MRKYYKNLYCKLLFFILVFLVFFIILIKNTIVRDILSLFFISFVIYYILKPIHTFLKHKGINEKFSALLLVVTLIMIIGV
FIISIIPAIIKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIGENILNKFVGFGENILDYA
VIPIIVYYFLAAGDKIIQKFFMIFPVKIRGMVKNVLEDIDKILVRYIISQIILCLIITILTFLVLIGLGIKLPILLSLIN
GFFNIIPYFGPVIGSLPAILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLVGGKIYGFVGM
VLAIPIGVIMKIIYEDLNYYLF

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=308, Percent_Identity=22.4025974025974, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38891; Mature: 38891

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYYKNLYCKLLFFILVFLVFFIILIKNTIVRDILSLFFISFVIYYILKPIHTFLKHKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
INEKFSALLLVVTLIMIIGVFIISIIPAIIKEGYNITSSVGYIQKYIDYIYNKINLLNNN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
KILGGILNKVNGKIENYTVSIGENILNKFVGFGENILDYAVIPIIVYYFLAAGDKIIQKF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
FMIFPVKIRGMVKNVLEDIDKILVRYIISQIILCLIITILTFLVLIGLGIKLPILLSLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GFFNIIPYFGPVIGSLPAILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
PLTVILLLLVGGKIYGFVGMVLAIPIGVIMKIIYEDLNYYLF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKYYKNLYCKLLFFILVFLVFFIILIKNTIVRDILSLFFISFVIYYILKPIHTFLKHKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
INEKFSALLLVVTLIMIIGVFIISIIPAIIKEGYNITSSVGYIQKYIDYIYNKINLLNNN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
KILGGILNKVNGKIENYTVSIGENILNKFVGFGENILDYAVIPIIVYYFLAAGDKIIQKF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
FMIFPVKIRGMVKNVLEDIDKILVRYIISQIILCLIITILTFLVLIGLGIKLPILLSLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GFFNIIPYFGPVIGSLPAILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
PLTVILLLLVGGKIYGFVGMVLAIPIGVIMKIIYEDLNYYLF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]