| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757180
Identifier: 170757180
GI number: 170757180
Start: 2736748
End: 2737236
Strand: Reverse
Name: 170757180
Synonym: CLD_1999
Alternate gene names: NA
Gene position: 2737236-2736748 (Counterclockwise)
Preceding gene: 170754548
Following gene: 170756779
Centisome position: 69.15
GC content: 20.04
Gene sequence:
>489_bases ATGTATAGAAGTAAATATTTTAAATATATGAATGTATATTATAGTAATGGTAAAAAAGTAGGTTTTATAAAGGATATATT AGTAGATTTTAATGAAGAAAGAATTATAGGTTTTTGTGTGAGCTCTTATAAAATATTAAATAAAAATAATATAGTACTTG TAGAGGATATAATATCAATAAATAAAAATATGGTGGTAAAAAAACTAGAAAGGGGAAAGTATTTAAGTTTTAATGATATA AAGCATTTAGAGGTTATAGATATAGAGGGCGTTTTAATGGGAGTTATTGAAGATATAATAATAAATGAAGGTAATTTTAG AATAGTTGCTATTATAATATCTATGGGATTTTTAAATAATTTTATAAAAGGGAAAAAAATAATAAGTCCTAATGAAATAA TATTAGGAGAAAGAAATCTACTTTATTTTAATTATAGAAGTAGAAATTTAGATTTTAAAATTATGGTTAAAAACAAAATG AATACATAG
Upstream 100 bases:
>100_bases TTTTATTTTTTTGATAAAACTAAAGGTAAGATGTTGGTAATTGGACTATAAGTTTTAGGAGTTTTTCAATTTTAAAATAT TAATATAAAGTGGGGTAAAG
Downstream 100 bases:
>100_bases GAGTAAGAGATCATGAGAAAATATTACAAAAATTTGTACTGTAAACTATTATTTTTTATATTAGTATTCCTAGTATTTTT TATTATACTTATAAAAAATA
Product: PRC-barrel domain-containing protein
Products: NA
Alternate protein names: PRC-Barrel Domain Protein
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISINKNMVVKKLERGKYLSFNDI KHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNNFIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKM NT
Sequences:
>Translated_162_residues MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISINKNMVVKKLERGKYLSFNDI KHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNNFIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKM NT >Mature_162_residues MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISINKNMVVKKLERGKYLSFNDI KHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNNFIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKM NT
Specific function: Unknown
COG id: COG3881
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18995; Mature: 18995
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISI CCCHHHEEEEEEEECCCCEEEHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEHHHHC NKNMVVKKLERGKYLSFNDIKHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNN CCCCEEHHHHCCCEECCCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHH FIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKMNT HHCCCEEECCCEEEEECCCEEEEEECCCCCEEEEEEECCCCC >Mature Secondary Structure MYRSKYFKYMNVYYSNGKKVGFIKDILVDFNEERIIGFCVSSYKILNKNNIVLVEDIISI CCCHHHEEEEEEEECCCCEEEHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEHHHHC NKNMVVKKLERGKYLSFNDIKHLEVIDIEGVLMGVIEDIIINEGNFRIVAIIISMGFLNN CCCCEEHHHHCCCEECCCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHH FIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKMNT HHCCCEEECCCEEEEECCCEEEEEECCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA