| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756758
Identifier: 170756758
GI number: 170756758
Start: 2276661
End: 2277371
Strand: Reverse
Name: 170756758
Synonym: CLD_2500
Alternate gene names: NA
Gene position: 2277371-2276661 (Counterclockwise)
Preceding gene: 170754887
Following gene: 170757103
Centisome position: 57.54
GC content: 35.44
Gene sequence:
>711_bases TTGAATAGAATATTTAAATATGAACTTAAAAGGCTGATTATAAATAAATTTTTCTTAGGATTACTTATTATTTCTGCTTT GTATAGCCATGAAATTATGCGTGGAGAAATAATTCTTGGGGTTTCAAATACTGCCCCATTCTCTGGCTGGAGCTATGGAA CATACCTTGCTAAAGTGTTGCCAATATTGCTTGTTACACTGCTGTTTTTTATATCTTTTCTTTATCAAAAACGGGAAAAG AGCGTACAGGTGTTAACTAAAGCAACCCCTATTGACCCGTTTAAGTTTCAAATGCTCCGCTTTGGAACTATAATTGTAGG CTTTGTTCTAATTTCTGCAGTGCCTATTGTTTATAGCTTGTGCTTCTATGCTGTGAATTTTCACTTTACTAATTTTGGAA AGCTTGTGTTGCCAGCAGTCATAACACTGCTACCAGCTATGTTGTTTGTGTTTGGTTTAGGAACTCTTGGAGGAAGGTAT CACCAGGGAGTAGTTTTTGTACTTATGGCAGCGGTGATGTTAGTAAGTTTCATTCCATTGCCATATGCAGTTGATTTATT TGGAGGAAACTTCTTTACAAAATATCCAGAATCTCTTGATTTAGTTGAACCAGCATTCTCAATACCTGTAAGCGTAGTAA TTGGAAAGTTTATGTATGGACTAACTGGTATTGGGATGGTGCTCTTATCTGGTATTCAAAAGAAAAAGTAA
Upstream 100 bases:
>100_bases GATGAAATTTTAGCTAAATTATATAAAAATAAATCAAAAACACAAATTACATGGCAGGATTTTCTAAATGCTTGTGGGCT AAAAGGGGAGGAGTTAAAAC
Downstream 100 bases:
>100_bases GTACTTTATTGAAATAATCTTTTCAACAGCTTGTTATAACAACTGTAGGCAGTTTGTTTTATGTAAAATATGAGGATATT AATTAAAAAATATGGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVLPILLVTLLFFISFLYQKREK SVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSLCFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRY HQGVVFVLMAAVMLVSFIPLPYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK
Sequences:
>Translated_236_residues MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVLPILLVTLLFFISFLYQKREK SVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSLCFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRY HQGVVFVLMAAVMLVSFIPLPYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK >Mature_236_residues MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVLPILLVTLLFFISFLYQKREK SVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSLCFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRY HQGVVFVLMAAVMLVSFIPLPYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26366; Mature: 26366
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHH PILLVTLLFFISFLYQKREKSVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRYHQGVVFVLMAAVMLVSFIPL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC PYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK CHHHHHHCCCHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHH PILLVTLLFFISFLYQKREKSVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRYHQGVVFVLMAAVMLVSFIPL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC PYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK CHHHHHHCCCHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA