| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756731
Identifier: 170756731
GI number: 170756731
Start: 2875559
End: 2876809
Strand: Reverse
Name: 170756731
Synonym: CLD_1866
Alternate gene names: NA
Gene position: 2876809-2875559 (Counterclockwise)
Preceding gene: 170755661
Following gene: 170756369
Centisome position: 72.68
GC content: 26.06
Gene sequence:
>1251_bases GTGAGAAAAAGAGATATAAAAATTTTTCAAGCTCATAATAATAGCCTTACTATAAAAGTAGATAACATACTTTTACATAG TGAATATTATCCAGAAAAAGTTTGTGAAAAGTTTATTGAAAATAATACAGATATTTATATGGACAAAAAAAATGTGGTAG TATATGGTATTGCTTTAGGGTATCATATACAAGCTTTATTAAATAGAGTTAGTGATGATACAATGATTCATGTCTTTGAT GTAGATAGAGAGATTTATAATACAGGTAAAAATTATGGAACATATAAAAATTTTATAAATGATCCCCGGGTTAATTTACA CATAGGAGCTTCTGATGAGTTTTTTTATAACTTAAAGTTAAAACTACAGGAAGTAGAAGATATCTTAATATATACACCTT CCTTGAAAATTTTGTCTGAGGAATATTCTAATATTAAAGATATATTTAGAAATTTTAAAATGGCTAAAATGGGCATAAAT GAATTTAAAGATATAATGGAAGAAAATTATCATTCCAATTTAAAAAAACATCATTTTACTATGAGGGATTTTTATAGCAA ATATAATTTTAGGGATGAAAAAATTATAATAGCAGCTTCGGGTCCTTCACTAGACGAAAACATTGAAAAATTAAAAAAAT TCCAAGGTAATATTAAAATATTTTCCGTGGGTAGTGCCCTTAGAACCTTAATAGATAACGGAATAAAGCCATATATGATA TGTATAATAGACCCATCTAAATTAGTTTATAATCAAATAAAAGGTTTTGAAAATTTAGATATACCATTATGTTTTTTAAA AACAGCATCTAGATGGGCAGTATCTAAATACAATGGCCCTAAGTATATGTTTTATAATGATGAAAATGATATTGATGATA TAGTAATAAACACAGGTAAGACTGTAGCTATTCCTACTATGGATATTGCAGTTAAAGGAGGAGCTAAAGAGGTACTTTTA GTAGGACAAGACTTAGCCTTTATAAATAATAAATCCCATACAGACTATATAAATGAAAGTTACAAAGATGCTAATATTAC TAATGAAGTAAAAGGTGACAATTCCTTATATAAAAAAGTGGAAGGGGTAAAAGGAGATATTTTGTATACTAGATCAGAAT ATTTAAATTTTAAGCATTTTATAGAATTAGAAATAAAAAACAATCCTCAAGTAAATTTTATTAATTGTAGCAGTGGTGCT AAAATAAGGGGCACAGAATATGTAGACTTAGAAAAAATAGAGTTTTCATAA
Upstream 100 bases:
>100_bases TAGGAGATATATTTATTTATAAGTTATTGCCAATTGTAAATAAAGTTGAAAATATGTTTACAAAATTAGTATAATTTTTG TAAGGATGGAGATGAAGTAA
Downstream 100 bases:
>100_bases AAATATTGTTGATTGTGTGAACAATCTAATTTTAGGTATACTAATAAAATAACAGATTTAGCAAAGGCAATGCTTTCAGA GTGTAAATTAAAGGGAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALGYHIQALLNRVSDDTMIHVFD VDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKLKLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGIN EFKDIMEENYHSNLKKHHFTMRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGKTVAIPTMDIAVKGGAKEVLL VGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKVEGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGA KIRGTEYVDLEKIEFS
Sequences:
>Translated_416_residues MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALGYHIQALLNRVSDDTMIHVFD VDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKLKLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGIN EFKDIMEENYHSNLKKHHFTMRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGKTVAIPTMDIAVKGGAKEVLL VGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKVEGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGA KIRGTEYVDLEKIEFS >Mature_416_residues MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALGYHIQALLNRVSDDTMIHVFD VDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKLKLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGIN EFKDIMEENYHSNLKKHHFTMRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGKTVAIPTMDIAVKGGAKEVLL VGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKVEGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGA KIRGTEYVDLEKIEFS
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48226; Mature: 48226
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALG CCCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCEEEEEEEHH YHIQALLNRVSDDTMIHVFDVDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKL HHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCHHHHCCCCCEEEEECCCCCEEEEEEE KLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGINEFKDIMEENYHSNLKKHHFT EEEECCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCHHHHCCH MRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCEEEE CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGK EEECCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCEEEEECCC TVAIPTMDIAVKGGAKEVLLVGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKV EEEEEEEEEEEECCCCEEEEEECCEEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHH EGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGAKIRGTEYVDLEKIEFS CCCCCEEEEEHHHHCCEEEEEEEEECCCCCEEEEECCCCCEECCCEEEEEEEEECC >Mature Secondary Structure MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALG CCCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCEEEEEEEHH YHIQALLNRVSDDTMIHVFDVDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKL HHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCHHHHCCCCCEEEEECCCCCEEEEEEE KLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGINEFKDIMEENYHSNLKKHHFT EEEECCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCHHHHCCH MRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCEEEE CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGK EEECCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCEEEEECCC TVAIPTMDIAVKGGAKEVLLVGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKV EEEEEEEEEEEECCCCEEEEEECCEEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHH EGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGAKIRGTEYVDLEKIEFS CCCCCEEEEEHHHHCCEEEEEEEEECCCCCEEEEECCCCCEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA