| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755661
Identifier: 170755661
GI number: 170755661
Start: 2876836
End: 2877156
Strand: Reverse
Name: 170755661
Synonym: CLD_1865
Alternate gene names: NA
Gene position: 2877156-2876836 (Counterclockwise)
Preceding gene: 170755117
Following gene: 170756731
Centisome position: 72.69
GC content: 18.69
Gene sequence:
>321_bases ATGAATGATATAAAAATAAATATAGAAGATTTAAAATCACAAATACTAATAATGGGAAATTATTTTCAATGCTTAGAAGA AAAAAAAGCATTATATTTAATATCTGAATTTACTAATGAGCTTTACAAATTTTACTCAGAATTAGTAAATGCAAGGATTC AAGATATGGATAATAGAAATTTATTAAGTTTAAACAATTGTTTTAAAGATATAATTGAGGGAATTAAAAATGAAGATTAT ATATATTTAGGAGATATATTTATTTATAAGTTATTGCCAATTGTAAATAAAGTTGAAAATATGTTTACAAAATTAGTATA A
Upstream 100 bases:
>100_bases AGACGATAATAAATAAGGGATATTGTTTTAAATGAGTAATTAAAAAGTTTATAATTTTTAGTGTATTATAAATTGAAAAT TTCTAAGGAGGTGAAATCAT
Downstream 100 bases:
>100_bases TTTTTGTAAGGATGGAGATGAAGTAAGTGAGAAAAAGAGATATAAAAATTTTTCAAGCTCATAATAATAGCCTTACTATA AAAGTAGATAACATACTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MNDIKINIEDLKSQILIMGNYFQCLEEKKALYLISEFTNELYKFYSELVNARIQDMDNRNLLSLNNCFKDIIEGIKNEDY IYLGDIFIYKLLPIVNKVENMFTKLV
Sequences:
>Translated_106_residues MNDIKINIEDLKSQILIMGNYFQCLEEKKALYLISEFTNELYKFYSELVNARIQDMDNRNLLSLNNCFKDIIEGIKNEDY IYLGDIFIYKLLPIVNKVENMFTKLV >Mature_106_residues MNDIKINIEDLKSQILIMGNYFQCLEEKKALYLISEFTNELYKFYSELVNARIQDMDNRNLLSLNNCFKDIIEGIKNEDY IYLGDIFIYKLLPIVNKVENMFTKLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12616; Mature: 12616
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIKINIEDLKSQILIMGNYFQCLEEKKALYLISEFTNELYKFYSELVNARIQDMDNRN CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LLSLNNCFKDIIEGIKNEDYIYLGDIFIYKLLPIVNKVENMFTKLV CHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNDIKINIEDLKSQILIMGNYFQCLEEKKALYLISEFTNELYKFYSELVNARIQDMDNRN CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LLSLNNCFKDIIEGIKNEDYIYLGDIFIYKLLPIVNKVENMFTKLV CHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA